Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00884 TCTGATGTTGGAGTGGGATTTCAAATTTTCAGGATTTTCAATGCTGACGATCAAAGGCCCGAACTTCCCTGGAAGAAAAATGACCCCATTAAACACATTGAAAATCCATTTCCACCATACAAGGAGCAGAAAACACCATTCTTCAAGTCAGAAGTTATTACTACTCGAAACGGCAGCGAAAAACCATGGCCGAAGCGAATCCTCGATCCAGGCGGTGATGTAATCCTGCAATGGAACAGGATTTTCCTGTTTTCTTGCTTAGTAGCACTATTTATCGATCCATTGTTCTTTTATCTCCCATCTGTTGTGAAGTCTGCCAGTTCATCTTGTATGACGACTGATTCCAATTTGGAAATTACTTTGACATTTTTCCGGACCGTCGGAGATGTTTTCTACTTGTTGCATCTTGTTTTTAAGTTTCGAACCTCCTATGTATCCCCGAGTTCCCGAGTTTTTGGCCGGGGCGAACTTGTGATGGATCCAAAAAAGATTGCTGGACGCTACTTGAGATCAGACTTCTTCATAGATCTGATAGCAACTCTACCCCTTCCTCAGATTGTAATTTGGTTTGTTATGCGGCAAGCTGATCATACAGACAATACCCTTGTACTGATTGTTTTGCTCCAATATGTTCCTAAATTGTATTTGATTTTCCCGTTAAGCGATCAAATTATCAAAGCCACCGGTGTCGTCACAAAGACTGCTTGGGCCGGGGCAGCTTATAATCTCCTGCTATACATGTTAGCTAGTCATGTTCTAGGAGCATCATGGTATCTACTGTCGGTAGAGCGGCACGCCTCTTGCTTGAAATCCGTATGCAGAAAGGAAATGGATTCTAATTCAATGTGCTCTCTTGATTACCTGCTGTGTAGTAGTTTGAATCTGGACAGTAGAAGGAGGTGGGAAGCAAATACTACTGTATTTAGCTACTGTAATCCAACTGAGGCTACAAGTTTCAACTATGGATTATTTGCAGATGCAATTGCAAAGAATGTCATCTACTCGAGTTTTTTCGAGAAGTATTTTTTCTGTCTTTGGTGGGGCCTGCAGAACTTGAGTTCTTATGGCCAGAGCCTGACTGCTAGTACATTTGTTGGAGAGACTGTTTTTGCTAGCTTCATTGCCATTGTGGGTCTGGTTTTGTTTGCCCATTTGATTGGAAATATGCAGACTTATTTGCAATCTATCTCGGTAAGACTGGAGGAGTGGAGGCTCAAGCAAAGGGACACCGAGGAGTGGATGAAGCACCGCCAACTCCCTCGAGATCTACAATGGCGTGTTCGTCGGTTTGTCCTGTATAAATGGGTTGCAACCCGAGGTGTTGATGAAGAGTCAATCCTACGAGCCCTTCCTGTCCCTTTTTTTGCACAAATGGACGATCAATTACTTGATGCAATATGCGAACGGTTAGTTTCGTCTTTAAGTACACAAGGCACTTACATTGTTCGTGAAGGTGACCTGGTGACCGAGATGCTCTTCATTATTCGAGGGAGGCTCGAGAGTTCTACAACAAACGGTGGCCGAAGTGGTTTCTTCAATTCAATAACATTAAGACCAGCAGATTTTTGTGGGGAAGAACTACTTTCATGGGCATTGCTTCCAACATCATCAGTGAGCTTGCCTTCTTCTACCCGAACGGTTAAAACTCTCGTTGAAGTCGAAGCCTTCGCTCTTTCTGCCGAAGATCTCAAATTCGTCGCTAATCAGTTTAAACGCCTCCATAGCAAGAAGCTTCAACACACATTCCGATTCTACTCGCACCATTGGAGAACTTGGGCTTCCTGTTATATTCAATCTGCATGGCGTCGACACCAAAAGCGGAAGATGGCAAAAACGCTTAGCGCTAAGGAATCATTCTACTTCACTCTCAAGAAGCCATCGGGGGAAGGAACTGAACAAGAAGAGGACGAGCCTTATTCTATGCATTCGAACAACTCGAAAGTGAAACAGAACCTCGGAGTTACGATACTGGCTTCGAGGTTTGCAGCTAACACACGCAGAGAAGCACAGAAAGTCAAGGATGTCAAATTGAAAAAGTTGCAGAAGCCGGACGAACCAGACTTCACGGCTGTGCCAGATGACTGA 2085 43.93 SDVGVGFQIFRIFNADDQRPELPWKKNDPIKHIENPFPPYKEQKTPFFKSEVITTRNGSEKPWPKRILDPGGDVILQWNRIFLFSCLVALFIDPLFFYLPSVVKSASSSCMTTDSNLEITLTFFRTVGDVFYLLHLVFKFRTSYVSPSSRVFGRGELVMDPKKIAGRYLRSDFFIDLIATLPLPQIVIWFVMRQADHTDNTLVLIVLLQYVPKLYLIFPLSDQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGASWYLLSVERHASCLKSVCRKEMDSNSMCSLDYLLCSSLNLDSRRRWEANTTVFSYCNPTEATSFNYGLFADAIAKNVIYSSFFEKYFFCLWWGLQNLSSYGQSLTASTFVGETVFASFIAIVGLVLFAHLIGNMQTYLQSISVRLEEWRLKQRDTEEWMKHRQLPRDLQWRVRRFVLYKWVATRGVDEESILRALPVPFFAQMDDQLLDAICERLVSSLSTQGTYIVREGDLVTEMLFIIRGRLESSTTNGGRSGFFNSITLRPADFCGEELLSWALLPTSSVSLPSSTRTVKTLVEVEAFALSAEDLKFVANQFKRLHSKKLQHTFRFYSHHWRTWASCYIQSAWRRHQKRKMAKTLSAKESFYFTLKKPSGEGTEQEEDEPYSMHSNNSKVKQNLGVTILASRFAANTRREAQKVKDVKLKKLQKPDEPDFTAVPDD 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8683641 8687297 + Bda005638.1 Bda11g00884 15992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00884 694 Gene3D Jelly Rolls 455 572 IPR014710 -
Bda11g00884 694 MobiDBLite consensus disorder prediction 628 642 - -
Bda11g00884 694 SMART cnmp_10 454 585 IPR000595 -
Bda11g00884 694 SUPERFAMILY Voltage-gated potassium channels 70 394 - -
Bda11g00884 694 Gene3D - 88 398 - -
Bda11g00884 694 ProSiteProfiles cAMP/cGMP binding motif profile. 454 528 IPR000595 -
Bda11g00884 694 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 48 691 - -
Bda11g00884 694 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 48 691 - -
Bda11g00884 694 CDD CAP_ED 454 585 IPR000595 -
Bda11g00884 694 Gene3D Helix hairpin bin 400 454 - -
Bda11g00884 694 SUPERFAMILY cAMP-binding domain-like 402 576 IPR018490 -
Bda11g00884 694 MobiDBLite consensus disorder prediction 626 645 - -
Bda11g00884 694 MobiDBLite consensus disorder prediction 672 694 - -
Bda11g00884 694 Pfam Ion transport protein 78 399 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00884 Bda-Chr11:8683641 Bda12g00522 Bda-Chr12:7998729 0 dispersed
Bda11g00884 Bda-Chr11:8683641 Bda02g00295 Bda-Chr2:42112849 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00884 K05391 - vvi:100267557 980.704