Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00887 ATGTGGTTGCCGTCAAAAAACACAGAGCCAAAAAGGGAAGGAGGGAATGGTCTGGTTGCTGTGGCCATCGACAAAGACAAAGGCAGCCAAAACGCTCTCAAATGGGCGATCGATCATCTTCTCCAGCGCGGCCAAACCGTCCTCCTCATCCACGTCAAGCTCCGGCTTCAATCTCTCTCCTCCTCCCCGACTCTTCCTTCCTCCTGGACGAACAACAATGACATGTCGTATGGAGGCACGGAGCCAGATTCCATAACCAAGGAGTTATTTCTTCCTTTCCGATGTTTTTGTACTCGTAAAGATATACAATGCAGAGATATCATGCTCGAGGATGTGGATGTCGCCAAGGCGTTGATCGAATACGTCAGCCAAACTGCGATTGAGAATCTCGTGATCGGTTCGCCGGCCAAATCGACCTTTCTGAGAAGATTCAAAGCGGTAGATATACCGAGCACGGCGCTGAAAGGTGCTCCGGATTTTTGCAATGTCTACGTGGTATCCAAAGGAAAAATCCATTCCATGCGATCGGCCTCACGTCCGGCTCCGGCTGTGTCGCCTCTACACGCTCAACTACCAAAACAAAGAAATAGTGTTTCAGATTTACTGGAACTCCATAGCCCGCAAGTTTCGATTAAGAAAGCCGCTCTGCCCCTTGAAGCACCGCAAAAATCTCAGGAAGAGGTCGAGTTCGTCAGCAGGTCGCCATTTACTCGGGAAAGATACACGGGAAGATCATATGGGGACACTTCGCAGTCAGATTCCAATGAATCCTACGTTACATCTGGAAGGGAAAGTATAGATCGGCTCTTCTCTTCATTCTACAATAATCTCGAGTCTGGAAAACAATCACCGCTCCCTATTTCGAGGAGCAGAACAGAAGGGGAATTGGACATTAATCGCAGCTTCGAGTCGTTACATTTAGGGAGGAGGTCGGTGGAAATGAGCACGCCTTCAGAATTTTCTTCTGTCTCGCAGGATAGTGAGAGATTGTCGACCGTTACACAGGCTAAGGTAGATGTCGAGAACGAGATGCGAAGGCTGAAGCTGGAGCTGAAGCAAACTATGCAAATGTATAGCACGGCCTGCAAGGAAGCCCTTTCGGCAACAAAAAAGGCAAAAGAGCTACAACGCTGGAAAGTGGAAGAAGAACAGAAATTCGAAGAGGCACGGCTGGCTGAGGAAGCTGCATTGGCCATTGTAGAGCAGGAAAAGGCCAAGTCCAGAGCTGCCATTGAAGCTGCTCAAGCAGCTAAAAGGATTGCAGAACTGGAAGCCGAGAAAAGAATTGAAGCAGAAAGAAAAGCTCTGAAAGAAGCAGAAGAGAAGAAGAAGGCATTCGAAGCTCTGGCGCAGACAGACGTGAGGTATAGGAGGTACTCCATTGATGAAATCGAGGCTGCAACTGAGTACTTCTCAGAGTCTCGCAAGATCGGAGAAGGAGGTTATGGGCCAGTCTACAAGTGTTTCCTTGATCACACATCAGTAGCTGTTAAAGTTCTCCGTCCCGATGCATCTCAAGGAAGATCACAGTTTCAGCAAGAGGTTGAGGTGCTGAGCTGCATTCGTCATCCAAACATGGTTCTCCTTTTGGGAGCCTGTCCAGAATACGGCTGCTTAGTTTACGAGTTCATGGCCAACGGAAGCTTAGAAGACCGACTTTTCCGGCGAGGAAATACACGATCTCTTCCATGGCAGATAAGGTTCAAAATTGCAGCAGAGATAGGCACTGGTCTACTCTTCCTCCATCAGACCAAGCCAGAACCACTCGTCCACCGTGACCTCAAACCAGCAAACATCCTTCTGGACCGAAACTATGTGAGTAAGATCAGCGATGTTGGCTTGGCTCGTCTAGTTCCATTGTCCGTCGCAGATAATGTCACCCAATATCGTATGACATCAACTGCTGGAACGTTCTGTTACATCGATCCTGAGTATCAACAAACAGGCATGCTCGGTGTCAAGTCCGATATATATTCTCTCGGCATCATGTTCCTACAGATGATCACAGCTAAACCCCCGATGGGATTGACCCATATTGTTGAGAGGGCAATCGAGAAGGACACATTTGTGGACATACTAGACCGCACCGTTCCTGACTGGCCTGTCGAAGAGGCCTTGTCCTTTGCCAAGATGGCTCTCAGCTGCGCCGAGCTCAGGCGAAAAGACAGACCGGATCTTGGAAAGAGCATCCTGCCTGAACTTAACCGGTTGAGATTATTAGCCGAAGAATCTATGCAACCTATGCCAATGGGCAGAGATGCCAACCCCTCGCCCAATCATAGCCAAGTTTCTGTGCAGCTAGTAAGTTCTATAATTTGCTCAAAACAATCTCCTTAA 2337 48.52 MWLPSKNTEPKREGGNGLVAVAIDKDKGSQNALKWAIDHLLQRGQTVLLIHVKLRLQSLSSSPTLPSSWTNNNDMSYGGTEPDSITKELFLPFRCFCTRKDIQCRDIMLEDVDVAKALIEYVSQTAIENLVIGSPAKSTFLRRFKAVDIPSTALKGAPDFCNVYVVSKGKIHSMRSASRPAPAVSPLHAQLPKQRNSVSDLLELHSPQVSIKKAALPLEAPQKSQEEVEFVSRSPFTRERYTGRSYGDTSQSDSNESYVTSGRESIDRLFSSFYNNLESGKQSPLPISRSRTEGELDINRSFESLHLGRRSVEMSTPSEFSSVSQDSERLSTVTQAKVDVENEMRRLKLELKQTMQMYSTACKEALSATKKAKELQRWKVEEEQKFEEARLAEEAALAIVEQEKAKSRAAIEAAQAAKRIAELEAEKRIEAERKALKEAEEKKKAFEALAQTDVRYRRYSIDEIEAATEYFSESRKIGEGGYGPVYKCFLDHTSVAVKVLRPDASQGRSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEFMANGSLEDRLFRRGNTRSLPWQIRFKIAAEIGTGLLFLHQTKPEPLVHRDLKPANILLDRNYVSKISDVGLARLVPLSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIMFLQMITAKPPMGLTHIVERAIEKDTFVDILDRTVPDWPVEEALSFAKMALSCAELRRKDRPDLGKSILPELNRLRLLAEESMQPMPMGRDANPSPNHSQVSVQLVSSIICSKQSP 778
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8708552 8711522 - Bda005641.1 Bda11g00887 15995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00887 778 MobiDBLite consensus disorder prediction 243 260 - -
Bda11g00887 778 CDD STK_N 18 169 - -
Bda11g00887 778 Coils Coil 397 449 - -
Bda11g00887 778 Gene3D Phosphorylase Kinase; domain 1 449 543 - -
Bda11g00887 778 Coils Coil 330 357 - -
Bda11g00887 778 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34-LIKE 8 771 - -
Bda11g00887 778 PANTHER OS02G0152300 PROTEIN 8 771 - -
Bda11g00887 778 Pfam Protein kinase domain 472 724 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00887 778 SMART serkin_6 471 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00887 778 Gene3D Transferase(Phosphotransferase) domain 1 544 748 - -
Bda11g00887 778 MobiDBLite consensus disorder prediction 239 260 - -
Bda11g00887 778 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 144 - -
Bda11g00887 778 Pfam Universal stress protein family 19 144 IPR006016 -
Bda11g00887 778 ProSitePatterns Serine/Threonine protein kinases active-site signature. 589 601 IPR008271 GO:0004672|GO:0006468
Bda11g00887 778 Gene3D HUPs 18 166 IPR014729 -
Bda11g00887 778 ProSiteProfiles Protein kinase domain profile. 471 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00887 778 SUPERFAMILY Protein kinase-like (PK-like) 453 725 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00960 Bda-Chr1:43177343 Bda11g00887 Bda-Chr11:8708552 0 dispersed
Bda06g00764 Bda-Chr6:10637430 Bda11g00887 Bda-Chr11:8708552 4.47E-132 dispersed
Bda10g00917 Bda-Chr10:43563018 Bda11g00887 Bda-Chr11:8708552 0 dispersed
Bda11g00887 Bda-Chr11:8708552 Bda11g01037 Bda-Chr11:10117529 7.25E-17 dispersed
Bda11g00887 Bda-Chr11:8708552 Bda13g01593 Bda-Chr13:39499540 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69911 PF00069 Pkinase 2.80E-41 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00887 - - twl:119993747 975.696