Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00909 ATGGCTTCCTTCGCAGCATCCAGAGCCGCAGCCTCCCTCGGCGTGTCCGAAATGTTGGGAAATCCTCTCAATTTCAGCGGAACCGCTCGCTCTGCTCCTCCCAATGCTTCAACGCCTTCCACCTTCAAGACTGTGGCTCTCTTTTCTAAGAAGAAACCCGCCAAGGCCAAGCCTGCCCCCGTTTCTTCAGCTGATGATGAGCTCTCCAAGTGGTATGGTCCGGACAGGAGGATATACTTGCCAGAGGGGCTTTTGGACCGATCTGAGATCCCTGAGTACTTGACCGGAGAAGTCCCCGGAGATTATGGTTACGATCCTTTTGGTTTGAGCAAGAAGCCTGCTGATTTCAGCAAATACCAAGCGTATGAGCTGATTCACTCGCGGTGGGCTATGCTTGGAGCCGCCGGGTTTATCATACCGGAGGCCTTCAACAAATTTGGAGCTAACTGTGGCCCTGAAGCTGTTTGGTTCAAGACGGGAGCTCTCCTCCTGGATGGAAACACATTGAACTACTTCGGAAAGAACATCCCCATCAACCTCGTTTTGGCGGTGATTGCCGAGGTTCTTCTTGTCGGCGGAGCTGAATACTACAGAATAATCAACGTCCTGGATTTGGAGGACAAGCTTCACCCTGGTGGTCCTTTTGACCCGTTGGGTCTGGCCAAGGATCCAGATCAGGCTGCCATTTTGAAGGTGAAGGAGATAAAGAATGGGCGGCTGGCTATGTTTTCGATGCTTGGATTCTTCATACAAGCCTATGTTACCGGGGAAGGACCGGTGGAGAACTTTGCCAAGCATCTCAGCGATCCGTTCGGCAACAACTTACTCACTGTGCTCGCCGGAAATGCAGAAAGAGCTCCCACCCTTTAA 870 52.07 MASFAASRAAASLGVSEMLGNPLNFSGTARSAPPNASTPSTFKTVALFSKKKPAKAKPAPVSSADDELSKWYGPDRRIYLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPADFSKYQAYELIHSRWAMLGAAGFIIPEAFNKFGANCGPEAVWFKTGALLLDGNTLNYFGKNIPINLVLAVIAEVLLVGGAEYYRIINVLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIKNGRLAMFSMLGFFIQAYVTGEGPVENFAKHLSDPFGNNLLTVLAGNAERAPTL 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8906510 8907852 + Bda005663.1 Bda11g00909 16017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00909 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
Bda11g00909 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Bda11g00909 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Bda11g00909 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
Bda11g00909 289 SUPERFAMILY Chlorophyll a-b binding protein 70 279 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00909 Bda-Chr11:8906510 Bda05g00187 Bda-Chr5:21442977 4.95E-66 dispersed
Bda15g00170 Bda-Chr15:4252509 Bda11g00909 Bda-Chr11:8906510 2.84E-40 dispersed
Bda11g00909 Bda-Chr11:8906510 Bda01g00815 Bda-Chr1:38644168 2.91E-66 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00909 K08916 - cpap:110818730 512.686