Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00932 ATGGAGGAATACAGTGGTAATGGGGGTGAACGTTCTCCTCCCACTTACAAAGGAGTCAGGAAGAGAAAATGGGGCAAATGGGTATCCGAAATTCGAGAGCCTGGAAAGAAGACCCGAATATGGCTCGGGAGTTATGAGGCGCCGGAAATGGCCGCCGCAGCCTACGACGTGGCGGCTTTACACCTAAAAGGATCAGGGACTCACCTCAATTTCCCTGAGTTGGCGGAGAGCCTACCTCGCCCGGCGAGTTCCAGGCCTGAAGATATTCAACTTGCGGCTCAAGAAGCAGCATTGCGGTTCAGAAAACCGGCGAGCTTTTCCACGTTGTCGCCAATGGATGAGTCTGGCGGAGAGAGAAACGTTCCGGCTGTGAGAGTGGGTCTGTCGGCGAGCCAAATTCAGGCGATCAACGACTGGCCATTGGATTCTCCGACTATGTGGATGGAAATGTGTGAAACCGAGTGTAGTAATAGCAGACTGTGGAATACGGAGTGGGAAGAAGAGACGAGGCAGAATCAATACGATCAGTCTCAGTCAATATGGGATTATTAA 552 51.81 MEEYSGNGGERSPPTYKGVRKRKWGKWVSEIREPGKKTRIWLGSYEAPEMAAAAYDVAALHLKGSGTHLNFPELAESLPRPASSRPEDIQLAAQEAALRFRKPASFSTLSPMDESGGERNVPAVRVGLSASQIQAINDWPLDSPTMWMEMCETECSNSRLWNTEWEEETRQNQYDQSQSIWDY 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9113856 9114407 - Bda005687.1 Bda11g00932 16040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00932 183 PRINTS Ethylene responsive element binding protein signature 38 54 IPR001471 GO:0003700|GO:0006355
Bda11g00932 183 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Bda11g00932 183 Gene3D AP2/ERF domain 15 73 IPR036955 GO:0003700|GO:0006355
Bda11g00932 183 ProSiteProfiles AP2/ERF domain profile. 15 72 IPR001471 GO:0003700|GO:0006355
Bda11g00932 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF022 14 182 - -
Bda11g00932 183 Pfam AP2 domain 14 64 IPR001471 GO:0003700|GO:0006355
Bda11g00932 183 MobiDBLite consensus disorder prediction 1 22 - -
Bda11g00932 183 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 182 - -
Bda11g00932 183 CDD AP2 16 74 IPR001471 GO:0003700|GO:0006355
Bda11g00932 183 SMART rav1_2 15 78 IPR001471 GO:0003700|GO:0006355
Bda11g00932 183 SUPERFAMILY DNA-binding domain 15 73 IPR016177 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00932 Bda-Chr11:9113856 Bda09g01132 Bda-Chr9:41989133 2.64E-37 dispersed
Bda11g00932 Bda-Chr11:9113856 Bda03g00351 Bda-Chr3:2967247 1.10E-90 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16637 PF00847 AP2 7.90E-13 CL0081 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00932 - - twl:120007866 200.29