Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00934 ATGGGCTGTATTTGCTCCAAAGAATCCCCTGAACCAGAGAAAGTCGATAACAGCGAGAAAGCGAATGAGTTTGACAAGTCTTCAGTTCAATTGATTGCTCCTATACCTTCAAATACAGAAGATTTTGTAGTAGAAATAAGAGGTGGTGGTCATAATGTTGGTTCAGTTAGCTTTTTATCAAGGCAGGCCTCGCAAAGAAATGGGGGGTCAGTTCAAGTACCCAAAGAGATAAATAGAAGTTCTATTGATGAAGAAAATAAAGTAAGAAATGGTGAAAGAAGAAGAAAGGACCATAATCTGCAATTGGCAAAAAAGGATGTGAGAGTGAATGGAAAACTACCGCAAATGTCAAGATTAATCAGCTTTCAGAATGGTGCTGAAGGTGGACAAGTTCTTGCTGGATGGCCATCTTGGTTAACTTCAGTAGCTGGAGATGCCATTAAAGGGTGGGTCCCTCGTCGAGCAGACTCATTTGAAAAGCTAGAGAAAATTGGTCAGGGAACTTATAGCAGTGTATATAAGGCCCGCGACCTAGAAAGTGGTAAAATTGTTGCATTGAAGAAAGTAAGATTTGTAAATATGGATCCAGAAAGTGTACGTTTTATGGCTAGAGAAATATGTGTTTTGCGTGAACTTGATCATCCAAATGTTATGAAGCTTGAGAGTCTAGTCACTTCGAGAATGTCATGCAGCTTGTACCTTGTCTTTGAGTACATGGAGCATGACCTAGCTGGGCTCATGGCAACTCCTGGCATCAAGTTTACCGAGCCTCAGATTAAATGCTTTATGCAACAATTATTGTGTGGGCTTGAACACTGCCACAGTAGAGGTGTTCTGCACCGAGACATCAAGGGCTCAAATCTTCTCATTGACAGCAATGGAGTTCTCAAGATTGGAGACTTTGGTTTGGCAACGTTTTTTAAGCCTGATCAAAAGCAGCCATTGACTAGTCATGTGGTGACGCTGTGGTATAGGGCACCCGAGCTTTTGCTTGGTTCGACTAAGTATGGACCCGCCATAGATCTTTGGAGCACAGGTTGCATACTTGCAGAATTGTTTGCAGGAAAACCTGTAATGCCTGGGAGAACAGAGGTAGAACAAATGCATAAGATTTTTAAGCTCTGTGGTTCACCATCTGAGGACTATTGGCAAAGAACTAAATTTCCGCATGCAACTAGTTTCAAGCCTCACCGCCCTTATAAGCGTTGTATTGTTGAGACATTCAGGAATTTGCCTCCCTCAGCTTTGGCTCTTGTTGATAAACTTCTAGCAATTAAGCCTGAGGAACGAGGATCTGCTAATTCTGCACTTAGAAGTGAGTTTTTCCGAACCGATCCCCTTCCTTGTGACCCTTCAAGTTTACCGAAATATCCTCCAAGTAAGGAGTTTGACGCCAAGCGACGAAATGAAGAAGCAAGAAGGCAAAAAGTAGAGGCTGTGAAGGGGCGTGGTCCTGAATCAGTTAGAAGAGGCTCAAGAGAAACCAAACTAGTACCAACACCGGAACTGAATGCAGAAGGAGACGTCAAATTGCTGTCAATCCCAAAAACATCCAGTCATAAATTCAATTCCAGAGATGATGATGGGACTGGAATTCCTATGGAGCCCCCTAGAGGAACTTCGCGAAATGGATTCTCTCATTCTAGTTCTATGATTCACCCCAATGTATTAGGATCGTCCTGGAATAAGCCAGGCAAACCTTTGACAAGTGACGAAGAGTTATGGTTACAGAGACTACAAAAGCCTCGAGATGTTGAAGATGTGTCAAACGCTTCTCTTAATAAAGAGATTAGTTTGCCTAAAAAAGACTCAGATTTGGGATATGTGCCGAAGAAAAGTAGAATACATTGCTCGGGGCCATTGCTGGCTCCAGGACGAAACATGGACGACATGCTGAAAGAGCACGAAAGACAGATCCAAGAGGCTGTTCGTAAAGCACGACTCGACAAATCAAGGACTGATAAAAGCCACAGCACAAACATTTAA 1986 42.75 MGCICSKESPEPEKVDNSEKANEFDKSSVQLIAPIPSNTEDFVVEIRGGGHNVGSVSFLSRQASQRNGGSVQVPKEINRSSIDEENKVRNGERRRKDHNLQLAKKDVRVNGKLPQMSRLISFQNGAEGGQVLAGWPSWLTSVAGDAIKGWVPRRADSFEKLEKIGQGTYSSVYKARDLESGKIVALKKVRFVNMDPESVRFMAREICVLRELDHPNVMKLESLVTSRMSCSLYLVFEYMEHDLAGLMATPGIKFTEPQIKCFMQQLLCGLEHCHSRGVLHRDIKGSNLLIDSNGVLKIGDFGLATFFKPDQKQPLTSHVVTLWYRAPELLLGSTKYGPAIDLWSTGCILAELFAGKPVMPGRTEVEQMHKIFKLCGSPSEDYWQRTKFPHATSFKPHRPYKRCIVETFRNLPPSALALVDKLLAIKPEERGSANSALRSEFFRTDPLPCDPSSLPKYPPSKEFDAKRRNEEARRQKVEAVKGRGPESVRRGSRETKLVPTPELNAEGDVKLLSIPKTSSHKFNSRDDDGTGIPMEPPRGTSRNGFSHSSSMIHPNVLGSSWNKPGKPLTSDEELWLQRLQKPRDVEDVSNASLNKEISLPKKDSDLGYVPKKSRIHCSGPLLAPGRNMDDMLKEHERQIQEAVRKARLDKSRTDKSHSTNI 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9121454 9125417 + Bda005689.1 Bda11g00934 16042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00934 661 MobiDBLite consensus disorder prediction 448 495 - -
Bda11g00934 661 MobiDBLite consensus disorder prediction 460 495 - -
Bda11g00934 661 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Bda11g00934 661 SUPERFAMILY Protein kinase-like (PK-like) 151 450 IPR011009 -
Bda11g00934 661 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 89 649 - -
Bda11g00934 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 278 290 IPR008271 GO:0004672|GO:0006468
Bda11g00934 661 SMART serkin_6 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00934 661 Pfam Protein kinase domain 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00934 661 ProSiteProfiles Protein kinase domain profile. 158 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00934 661 MobiDBLite consensus disorder prediction 78 97 - -
Bda11g00934 661 MobiDBLite consensus disorder prediction 64 97 - -
Bda11g00934 661 Coils Coil 625 652 - -
Bda11g00934 661 MobiDBLite consensus disorder prediction 517 551 - -
Bda11g00934 661 Gene3D Phosphorylase Kinase; domain 1 145 240 - -
Bda11g00934 661 MobiDBLite consensus disorder prediction 9 23 - -
Bda11g00934 661 Gene3D Transferase(Phosphotransferase) domain 1 241 482 - -
Bda11g00934 661 PANTHER CELL DIVISION PROTEIN KINASE 89 649 - -
Bda11g00934 661 MobiDBLite consensus disorder prediction 1 24 - -
Bda11g00934 661 MobiDBLite consensus disorder prediction 642 661 - -
Bda11g00934 661 CDD STKc_CDK9_like 158 442 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g01151 Bda-Chr10:45572664 Bda11g00934 Bda-Chr11:9121454 3.98E-12 dispersed
Bda11g00934 Bda-Chr11:9121454 Bda13g00161 Bda-Chr13:2092316 0 dispersed
Bda02g00410 Bda-Chr2:44671074 Bda11g00934 Bda-Chr11:9121454 7.42E-10 transposed
Bda02g00600 Bda-Chr2:46856943 Bda11g00934 Bda-Chr11:9121454 1.62E-121 transposed
Bda11g00934 Bda-Chr11:9121454 Bda03g00348 Bda-Chr3:2930185 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69913 PF00069 Pkinase 1.30E-69 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00934 K08819 - twl:119990831 888.641