Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00940 | ATGGAAGTGAGTTCAGGTTTAGTGGCAGGCTCTCACAACAGGAATGAAATTGTTATCATTCGCAGCAACGGGGAATCTGGCAAAAAACCATTTGAGCAGTCGAGTGGAAAATTATGCCAGATTTGTGGAGATGATGTAGGACTAAGTGCTGAAAGAGAGGTGTTTGTTGCCTGCAACGAGTGTGCCTTTCCGATTTGCCGGACCTGCTACGAGTACGAACGCCGAGAAGGAAATCAAGTCTGCCCTCAGTGCAAGACCAGATTTAAACGTATTAAAGGTTGTGCAAGAGTTGAAGGAGATGAAGAAGAAGACGACGTTGATGACTTGGACAATGAATTTGATTTCCACGAACAAAGTAAGCGGGATATGCATCGACCTCAAGCAGCTGATTCCGATATTTCTCTCTTCGCTAATTGTCGATTGGTATCGCCGATGAAATCCACCCCGAAGAATGTGCTTCATTCCCTCCACTGGCAGGTGCTACTCCAATCTCAGATCCCATCATTCAATGTCACTGCTGACTTCTTTCAAAATTTTAACCTTAGACACAATGCTTCAACTACAGTGCATCCAAGACCAATGGATCCTTCCAAAGACCTAGCTGTATATGGCTATGGAAGCATTGCCTGGAAGGAGAGGATGGAGAGTTGGAAACGGAGGCAAAATGAACTACAGATGATGAACAATGATGGGTGGAAAAACTTGGATCATGATGAAGATGATCCAGATGTGCCTCTAATGGATGAGGCCAGACAGCCATTGTCAAGAAAGTTGCCAATTCCATCGAGCCAAATCAACCCATATCGAATGATCATCGTTATTAGGATGGTTGTTATGGGGTTCTTTTTCCATTATCGAGTTACACATCCCGTGTGGGATGCCTATATTCTGTGGCTCGTATCAGTAATATGCGAGATTTGTTTTGCCATTTCATGGATTCTTGATCAATTCCCAAAGTGGCTCCCCATCGGCCGAGAAACTTATCCTTGTAGGTTGTCTCTCCGGTATGAGAAAGAAGGCCAACCTTGTCAACTGTCAGCAATTGATATATTTGTCAGCACAGTTGATCCATCAAAAGAACCTCCTCTGGTGACTGCAAACACACTTCTTTCCATTCTTGCAGTTGATTATCCTGCTGATAAGGTTTCTTGCTATGTTTCGGATGATGGTGCGGCCATGCTAACTTTCGAGGCACTCTCGGAAACAGCTGAGTTTGCTAGGAAATGGATCCCTTACTGCAAGAAGTTTAAAATCGAACCAAGGGCCCCCGAACGCTATTTTGATCAGAAAGTTGACTATTTCTCCGATAAAGTCCTACCGTCTTTCGTGAAGGAGCGGAGAGCCATGAAGAGAGAGTATGAAGAATTTAAAGTTCGGATCAATTCTTTGGTTGCAAAGTCTAAGAAGGTCCCGGATGAAGGGTGGACGATGCAGGACGGGACTTTGTGGCCGGGAAACAACGGTCGAGATCATCCCGGGATGATTCAGATTTTTCTCGGACAAACCGGAGGCTACGATGCCGATGGGAATGAATTACCCTGCATGGTTTATATGTCTAGAGAGAAGAGGCCTGGCTTTAATCACAACAACAAGGCTGGAGCAATGAATTGTCTAGTTCGAGTGTCGGCTGTACTCACAAATGCGCCTTATGTGTTGAACTTAGACTGTGATCACTACATCAACAGTAGTAATGCTCTTAGGGAGGCTATGTGTTTTATGATGGATCCTTTGGTCGGAAAGAGAGTTTGCTACGTTCAGTTCCCACCGTGTAATCGAAACGCTGTTTTTTCCGACATAAACACGAAAGGTTTGGACAGTATTCAAGGACCGATATATGTCGGGACTGGATGCGTCTTCAGAAGGCTGGCTCTCTACGGTTATGATGCTCCAAAACCGAAGAAATCGCCAGCGAAAACATGCAACTGCTGGCTGAAGTGGTGCTGTTTTGATTGCTGTTTTTCTGCAAAGCCGCATACGAGGAAGCCTAAAGCCGAGGGGACAAAAAATATTTCTGGAAATGAAGAACTGGAAGAGCTACTTGCCTGTTCCTCAGATAGTACACAGGAGAGCATTGATGGTAAGCTGGCAAAGAAGTTCGGGCAGTCTCCTGTGTTTGCTGCATCGACACTCGGAGAACTGAAACGAACTAGCCCCGAATCTTCGCTCAAAGAAGCTATTCATGTCATTAGCTGTGGCTATGAGGATAAAACGGAATGGGGAAATGAGGTTGGTTGGATCTATGGTTCAGCCACTGCAGATATACAGACTGGCTTAAAAATGCACTGTCGTGGATGGAGATCGATATATTGCGTACCCGAAAGACCTGCATTCAAAGGGTCTGCCCTGATTGATCTTTCGGATCGACTCCACCAAGTTCTTCGATCGGCCATTGGCTCCATTGAACTCGGCAAAGTGGCTGGCTTGTGGTTTATCTCTCTTTTTATGTGCATATTTGCAACCAGTCTGCTGGAAATGAAGTGGGGAGGAGTCGGAATCGGAGAGTGGTGGAGAAACGAGCAGTTTTGGGTGATTGATGGAGTCTCAGCCCATCTTTTTGCAGTCTGCCAGGGGCTGTTAAAGGTCATAGCCGGCGTCGAGACATCGAAAACAGGGGATGGTGAAGAGTTTTCCGAATTTTGTGCATTCAAACGGAGAATTTTACTCTTTCCACCGACAAGTCTGCTCGTCATAAACTTGATTGGGGTAGTGTTTGGAGTGTCAAGTGTGATAAATAATGGGTTTGAATCATGGGGGCCGCTGCTTGGGAAGCTATGTTTTGCGTTGTGGGTGATTGTTCACTTGTATCCTCTCTTAAAGGGTGTCTTGGGTGGGCAGAATAAGACTCCAACAATAATCTTAGTCTGGTCAGTCTTGCTTGCCTCTCTCTTTTCTATTCTCTTGGTTCAAATGGGACCATTTTCGGCCAAGACAGATGCTACGTTCTTGGACGAATGCGGGGTGGACTGTGTTTAG | 2973 | 45.54 | MEVSSGLVAGSHNRNEIVIIRSNGESGKKPFEQSSGKLCQICGDDVGLSAEREVFVACNECAFPICRTCYEYERREGNQVCPQCKTRFKRIKGCARVEGDEEEDDVDDLDNEFDFHEQSKRDMHRPQAADSDISLFANCRLVSPMKSTPKNVLHSLHWQVLLQSQIPSFNVTADFFQNFNLRHNASTTVHPRPMDPSKDLAVYGYGSIAWKERMESWKRRQNELQMMNNDGWKNLDHDEDDPDVPLMDEARQPLSRKLPIPSSQINPYRMIIVIRMVVMGFFFHYRVTHPVWDAYILWLVSVICEICFAISWILDQFPKWLPIGRETYPCRLSLRYEKEGQPCQLSAIDIFVSTVDPSKEPPLVTANTLLSILAVDYPADKVSCYVSDDGAAMLTFEALSETAEFARKWIPYCKKFKIEPRAPERYFDQKVDYFSDKVLPSFVKERRAMKREYEEFKVRINSLVAKSKKVPDEGWTMQDGTLWPGNNGRDHPGMIQIFLGQTGGYDADGNELPCMVYMSREKRPGFNHNNKAGAMNCLVRVSAVLTNAPYVLNLDCDHYINSSNALREAMCFMMDPLVGKRVCYVQFPPCNRNAVFSDINTKGLDSIQGPIYVGTGCVFRRLALYGYDAPKPKKSPAKTCNCWLKWCCFDCCFSAKPHTRKPKAEGTKNISGNEELEELLACSSDSTQESIDGKLAKKFGQSPVFAASTLGELKRTSPESSLKEAIHVISCGYEDKTEWGNEVGWIYGSATADIQTGLKMHCRGWRSIYCVPERPAFKGSALIDLSDRLHQVLRSAIGSIELGKVAGLWFISLFMCIFATSLLEMKWGGVGIGEWWRNEQFWVIDGVSAHLFAVCQGLLKVIAGVETSKTGDGEEFSEFCAFKRRILLFPPTSLLVINLIGVVFGVSSVINNGFESWGPLLGKLCFALWVIVHLYPLLKGVLGGQNKTPTIILVWSVLLASLFSILLVQMGPFSAKTDATFLDECGVDCV | 990 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9195821 | 9199962 | - | Bda005698.2 | Bda11g00940 | 16048 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00940 | 990 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 112 | IPR013083 | - | |
Bda11g00940 | 990 | CDD | mRING-HC-C4C4_CesA_plant | 37 | 87 | - | - | |
Bda11g00940 | 990 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 26 | 802 | - | - | |
Bda11g00940 | 990 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 801 | 989 | - | - | |
Bda11g00940 | 990 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 360 | 768 | IPR029044 | - | |
Bda11g00940 | 990 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED | 26 | 802 | - | - | |
Bda11g00940 | 990 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 3 [UDP-FORMING]-RELATED | 801 | 989 | - | - | |
Bda11g00940 | 990 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 508 | 629 | IPR029044 | - | |
Bda11g00940 | 990 | Coils | Coil | 446 | 466 | - | - | |
Bda11g00940 | 990 | Pfam | Cellulose synthase | 348 | 802 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Bda11g00940 | 990 | SUPERFAMILY | RING/U-box | 24 | 111 | - | - | |
Bda11g00940 | 990 | ProSiteProfiles | Zinc finger RING-type profile. | 39 | 85 | IPR001841 | - | |
Bda11g00940 | 990 | Pfam | Zinc-binding RING-finger | 29 | 106 | IPR027934 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00967 | Bda-Chr7:11564351 | Bda11g00940 | Bda-Chr11:9195821 | 1.22E-08 | dispersed | |
Bda11g00940 | Bda-Chr11:9195821 | Bda14g01064 | Bda-Chr14:9146473 | 0 | dispersed | |
Bda11g00940 | Bda-Chr11:9195821 | Bda01g00738 | Bda-Chr1:34669730 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00940 | K10999 | - | zju:107416055 | 1381.31 |