Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00947 ATGGCCGCAGTAATGGCGGACGACGCCATATCGGGATGCCCGTCGAAATGCGGGAACGTAACGATTCCATATCCCTTCGGCGTCGGAGTGGGATGCCATTTGGGAGAAGGGTTCGACATAGCTTGCAATACTTCCTTCGATCCACCGAAACCATTCGTCGGAAATTTGGAAATCAAAGAAATATCTATGAATCAGCTGCGAATTAATAACTGGGTGGCTTTCAATTGCTACGCCGAATCCGGGGCTCGAACCGCATGGTCCCCAGCTTCTATCAATCTGGCCAATCGCCCTTTCGTCTTCTCCTCTGCAAATGCCTTCACTGTCGTTGGGTGCGACACCTTGGCCTTGATTCAGGGTTTGCAGGGGTTCGATTACACCAGTGGCTGCGTTTCCCTCTGCGCAAGCAAGGACGAAGTCACTAATGGCTCCTGCTCTGGTATTGGGTGCTGCCAGACTGCAATTCCCAGAGGGCTTAAGACCTTCCAAGCTGCCATAGGTAACCTCAACAATCACACCAAGACCTGGAAGTATAATCCTTGCAGCTACGCTTTTTTGGCCGACAGACAAGCTTACACCTTCGAGGTCTCCGATCTGGGCGATCCTAGTTTTTTAGCAACTATTAAGAATGATATCCCAGTTGTTCTTGAATGGTCCGTGGGTGTCAGTACCTGCGAGGATGCCCGACATGGGTTAGCCCCGTTTGTTTGCCAGAACAATTCTGAATGCTACGATTCAGAAAATGGTCCTGGCTATCTCTGCCGCTGCTCCCAAGGTTATCAAGGAAACCCCTATCTCTCACCGGGATGCCAAGATATCGACGAGTGCGATGGCCCAAACAATCCCTGCGAAGGAATCTGCGTCAATACGCCGGGAAGTTATTACTGCGCTTGCCCCAAGGGAAGCTATGGCGACGGTACAAAAAGCGGCAAGGGCTGCATAAAAAAGAATGTTCGATTTCCGCTGCTCCAAGTTAGCGCAAGCTTCGGTTTCTTGTCTCTGATCATCGGATCCTCATTACTATACTTCAGCCTGAAAAAAAGGCGCCTCGTTAAACTCAGAGAGAAGTTCTTCAAGGAGAATGGAGGATTGCTTTTGCAGCAGCAATTAGCCGGCCGTGAAGGTGGCGTAGATCAGTCATCGAGAATCTTTACGGCGGAGGAGCTTGAGAAGGCTACCGATAACTACTCTGAAAGCCGAGTGCTCGGCAGGGGAGGCAATGGAACAGTGTACAAAGGAATTTTACCAGACAATAAGATCGTTGCCATAAAGAAGTCTAAAATTGCAGGGGAGAGCCAAATGGAGCAGTTCATAAACGAAGTGGTCATGCTCACCCAAATCAATCACCGGAACGTGGTGAAGCTCCTCGGCTGCTGTCTCGAGACGGAGGTACCGCTTCTGGTTTATGAATACGTCTCGAACGGAACTCTATTTTACCATATCCACCACCGTAATAGCAGGATCAACTCGATGTCGTGGGACAACCGCCTGAGAATAGCCACTGAAACTGCTTCGGCACTCTCCTACCTCCACTCTGCCGCTTCCATTCCGATCATTCACCGGGACGTCAAGTCGGCAAATATTTTGTTGGACTCCAAATGTAATGCCAAAGTAGCTGATTTTGGAGCTTCCAAGTTTATTCCGATCGATCAGTCTCAGATAAACACGCTGGTTCAAGGCACCTTCGGTTACTTGGATCCCGAATATTTCCAGACCAGTCAGCTCACGGAAAAGAGCGATGTCTACAGTTTCGGAGTAGTTCTAGCCGAACTTTTGACTGGAGAGACGGCGGTGTCCTTTGACAGACCCGAAGATCAAAGAAATCTGTCTGCCTACTTTGTTTCTTCCTTGCAACGGAATCGCATATTTCACATTTTCGAGGCTAGAGTTTTGAGAGAGGGGAATAGAGATCAACTCATGGCTGTGGCAGAGCTTACCAGAAGATGCCTCAAGCTCAAGGGCGATGATCGGCCGACGATGAGGGAAGTGGTTGCAGAGTTAGAAGGCTTGAGCCGGCTGCAGAATCACCCTTGGGTTCGTCCAGACAACGAAGTCGATACTCATAGTTTGCTCGACACTGCCTGTGATCTCTATCCAATCCCTCCCAGTCAGAATGGCATTTCTTCCGGGACCTTCGGCAGCGCAGAATCCTCAAGCATTTCCTCGGATAATCCCACGATTCTTCCCTCATACCTCTCGAGATGA 2202 49.73 MAAVMADDAISGCPSKCGNVTIPYPFGVGVGCHLGEGFDIACNTSFDPPKPFVGNLEIKEISMNQLRINNWVAFNCYAESGARTAWSPASINLANRPFVFSSANAFTVVGCDTLALIQGLQGFDYTSGCVSLCASKDEVTNGSCSGIGCCQTAIPRGLKTFQAAIGNLNNHTKTWKYNPCSYAFLADRQAYTFEVSDLGDPSFLATIKNDIPVVLEWSVGVSTCEDARHGLAPFVCQNNSECYDSENGPGYLCRCSQGYQGNPYLSPGCQDIDECDGPNNPCEGICVNTPGSYYCACPKGSYGDGTKSGKGCIKKNVRFPLLQVSASFGFLSLIIGSSLLYFSLKKRRLVKLREKFFKENGGLLLQQQLAGREGGVDQSSRIFTAEELEKATDNYSESRVLGRGGNGTVYKGILPDNKIVAIKKSKIAGESQMEQFINEVVMLTQINHRNVVKLLGCCLETEVPLLVYEYVSNGTLFYHIHHRNSRINSMSWDNRLRIATETASALSYLHSAASIPIIHRDVKSANILLDSKCNAKVADFGASKFIPIDQSQINTLVQGTFGYLDPEYFQTSQLTEKSDVYSFGVVLAELLTGETAVSFDRPEDQRNLSAYFVSSLQRNRIFHIFEARVLREGNRDQLMAVAELTRRCLKLKGDDRPTMREVVAELEGLSRLQNHPWVRPDNEVDTHSLLDTACDLYPIPPSQNGISSGTFGSAESSSISSDNPTILPSYLSR 733
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9235632 9238048 - Bda005706.2 Bda11g00947 16055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00947 733 SUPERFAMILY EGF/Laminin 269 314 - -
Bda11g00947 733 CDD STKc_IRAK 401 669 - -
Bda11g00947 733 Gene3D Phosphorylase Kinase; domain 1 371 470 - -
Bda11g00947 733 Pfam Calcium-binding EGF domain 271 302 IPR001881 GO:0005509
Bda11g00947 733 CDD EGF_CA 271 304 - -
Bda11g00947 733 SMART egf_5 274 313 IPR000742 -
Bda11g00947 733 SMART egf_5 223 270 IPR000742 -
Bda11g00947 733 Pfam Protein kinase domain 395 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00947 733 ProSiteProfiles Protein kinase domain profile. 395 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g00947 733 PANTHER WALL-ASSOCIATED RECEPTOR KINASE 2-LIKE 10 683 - -
Bda11g00947 733 SMART egfca_6 271 313 IPR001881 GO:0005509
Bda11g00947 733 MobiDBLite consensus disorder prediction 707 733 - -
Bda11g00947 733 ProSitePatterns Aspartic acid and asparagine hydroxylation site. 286 297 IPR000152 -
Bda11g00947 733 Pfam Wall-associated receptor kinase galacturonan-binding 13 65 IPR025287 GO:0030247
Bda11g00947 733 Gene3D Transferase(Phosphotransferase) domain 1 471 688 - -
Bda11g00947 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 517 529 IPR008271 GO:0004672|GO:0006468
Bda11g00947 733 ProSitePatterns Protein kinases ATP-binding region signature. 401 424 IPR017441 GO:0005524
Bda11g00947 733 SUPERFAMILY Protein kinase-like (PK-like) 379 667 IPR011009 -
Bda11g00947 733 Pfam Wall-associated kinase 142 256 IPR013695 GO:0004674|GO:0016021
Bda11g00947 733 ProSiteProfiles EGF-like domain profile. 226 270 IPR000742 -
Bda11g00947 733 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 10 683 IPR045274 GO:0007166
Bda11g00947 733 Gene3D Laminin 274 314 - -
Bda11g00947 733 ProSiteProfiles EGF-like domain profile. 271 307 IPR000742 -
Bda11g00947 733 Gene3D Laminin 221 273 - -
Bda11g00947 733 ProSitePatterns Calcium-binding EGF-like domain signature. 271 295 IPR018097 GO:0005509
Bda11g00947 733 SMART serkin_6 395 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00592 Bda-Chr9:8439454 Bda11g00947 Bda-Chr11:9235632 0 dispersed
Bda09g00593 Bda-Chr9:8481572 Bda11g00947 Bda-Chr11:9235632 0 dispersed
Bda11g00947 Bda-Chr11:9235632 Bda13g01455 Bda-Chr13:37372959 0 dispersed
Bda13g01454 Bda-Chr13:37342392 Bda11g00947 Bda-Chr11:9235632 3.95E-48 dispersed
Bda11g00947 Bda-Chr11:9235632 Bda09g00589 Bda-Chr9:8332568 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69914 PF00069 Pkinase 2.60E-50 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00947 - - csv:101219978 974.156