Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00965 ATGGAAAAACAGAGAGCGAAGGAGATTGCGATCATCGGCGCCGGAGTCAGCGGCCTCCTAGCCTGCAAATGTGCGGTGGAAAAAGGGTTCAGCCCCGTCGTCTTCGAAGCAACGAGCATCATAGGAGGGGTTTGGTCCAAAACTATAGAGTCCACCAAGCTTCAAACGCCCAAAAGCTTTTACCAGTTCTCAGATTTTCCATGGCCTTCTTCCACGAAAGAGACATTCCCTCGCCATGATCAAGTGGTGGAGTACCTTCAAGCCTACGCTACCCACTTTAACATTCACCCCAACATCAAATTCAACTCTAAAGTCGTCACTATCGACTTTTGTGGACCGTCCGATGAGACCATGGTTTGCTGGGATTTATGGGGTGGAACAGGTGGCCCTTTCTCTCCTGCTGGCAAGTGGAATCTCACTGTAAATGAAGCCGATAGATTTTTGTTGCAGAAAGTGAAGGTTTATGAGTTTGATTTTGTGATTCTCTGCATTGGAAAGTACAGTGATCTTCCAAACTACCCAGATTTTCCTCTAAACAGAGGGCCTGAAATTTTTGGAGGTAAAGTCTTGCATTCAATGGACTATTCTGCTATGGATGACGAAAGTGCTGCAGAATTAATCAAAGATAAGCTCGTCACCGTCGTGGGTTTTCAGAAATCAGCGTTGGATATTGCAGCAGAAGTCGCAAAAAAGAATGGGGAAAGACACCCTTGTACGTTACTGTTCAGAGCAGCTCACTGGACCGTTCCTGAAAAATTTCTCTCTCTTTTGTCACGAGGGTTCAATCGCTTTACAGAGATGATGATTCACAAGCCCGACGAAGGATTCTTCCTCTGTCTCTTAGTTTTCATTCTAACCCCATTGATGCACATATTTGGGAAACTGGTGGAATTGTATCTTACGCTGATTTATCCATTGAAGAAATACGACTTGGTTCCTAGCCATAGCTTCCTTCACCAGATTTCTTCGTGCATGTTCACGGTTTTGCCCTCTAATTTCTATAACCTCATGAAGAAAAGGAAACTCGTTCTTAAAAAATCAGAGTTTTTGGACTTTTGTGACGAGGGTCTGATCGTTAATGGCGAAACCACGCCTGTTTCATCAGATATCGTCATTTTCGCTACTGGGTACAAAAGCGACGAAAAGCTTAACAACATTTTCTCTTCGTCTTACTTCCAGAAATGCATGACTTCTTTGACTGCTCCACTCTACAGAGAATGCATCCATCCTCGAATTCCAAGCTTGGGAATACTTGGATATGCAGACAGTACGTCGGTTCTGTTCACGACGGAGATGAGAGCCAAGTGGATGTGCCATTTTCTGGCAGGAAAATTGAGATTACCTTCCGTTAGAGAGATGGAAAGCTACGGTATTCAATGGGAGAAATGTATGAGAAAGTATTCGAGAGGAGAGTATAACAGATTATGTGCAGCGGCTCTGCTTCAAATTCACTGCAACGACCAACTCTGCAGAGACATTGGCTGCAACCCCAGACGGAAAAAGTGGTTCCTCCCCAATCTCTTTGCTTCCCACAGTCCAGTGGATTACAGAAGCATGGACTCTTAA 1566 44.57 MEKQRAKEIAIIGAGVSGLLACKCAVEKGFSPVVFEATSIIGGVWSKTIESTKLQTPKSFYQFSDFPWPSSTKETFPRHDQVVEYLQAYATHFNIHPNIKFNSKVVTIDFCGPSDETMVCWDLWGGTGGPFSPAGKWNLTVNEADRFLLQKVKVYEFDFVILCIGKYSDLPNYPDFPLNRGPEIFGGKVLHSMDYSAMDDESAAELIKDKLVTVVGFQKSALDIAAEVAKKNGERHPCTLLFRAAHWTVPEKFLSLLSRGFNRFTEMMIHKPDEGFFLCLLVFILTPLMHIFGKLVELYLTLIYPLKKYDLVPSHSFLHQISSCMFTVLPSNFYNLMKKRKLVLKKSEFLDFCDEGLIVNGETTPVSSDIVIFATGYKSDEKLNNIFSSSYFQKCMTSLTAPLYRECIHPRIPSLGILGYADSTSVLFTTEMRAKWMCHFLAGKLRLPSVREMESYGIQWEKCMRKYSRGEYNRLCAAALLQIHCNDQLCRDIGCNPRRKKWFLPNLFASHSPVDYRSMDS 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9419597 9421604 + Bda005727.1 Bda11g00965 16073

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00965 521 Gene3D - 2 274 IPR036188 -
Bda11g00965 521 Pfam Flavin-binding monooxygenase-like 6 497 IPR020946 GO:0004499|GO:0050660|GO:0050661
Bda11g00965 521 Gene3D - 352 503 IPR036188 -
Bda11g00965 521 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Bda11g00965 521 SUPERFAMILY FAD/NAD(P)-binding domain 7 236 IPR036188 -
Bda11g00965 521 PANTHER DIMETHYLANILINE MONOOXYGENASE 6 518 - -
Bda11g00965 521 SUPERFAMILY FAD/NAD(P)-binding domain 360 518 IPR036188 -
Bda11g00965 521 PIRSF FMO 5 508 IPR000960 GO:0050660|GO:0050661
Bda11g00965 521 PANTHER FLAVIN-CONTAINING MONOOXYGENASE 6 518 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00965 K00485 FMO; dimethylaniline monooxygenase (N-oxide forming) / hypotaurine monooxygenase [EC:1.14.13.8 1.8.1.-] - pop:7494692 706.442
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda06g00437 Bda-Chr6:6437032 Bda11g00965 Bda-Chr11:9419597 8.19E-180 dispersed
Bda11g00091 Bda-Chr11:1049257 Bda11g00965 Bda-Chr11:9419597 2.18E-108 dispersed
Bda11g00965 Bda-Chr11:9419597 Bda08g00015 Bda-Chr8:147248 1.22E-19 dispersed
Bda11g00965 Bda-Chr11:9419597 Bda01g01986 Bda-Chr1:56221736 2.17E-111 transposed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g105 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bda11g00965 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000621 2 8 2 2 1 4 2 5 5 4 3 5 4 3 4 4 4 1 1 3 4 3 2 4 4 3 1 4 3 7 102