Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00971 ATGTTTGTGCAGCACACGGAAGCAATGTTGGAAGAAATTGATAGGATGGATGAAGTTGAAATGAAAGATATAAACGAGGATCCCGTCGAGGATATAGACAGCTGCGATAAGAACAATTCACTGGCTGTTGTCGAGTACTTAGAAGATTTATTTAGCCATTATAGGAATGCTGAGATTTCAAACTGTGCTTCGCCAGATTACATGGATCAGCAATCGGATATTAATGAAAGAATGAGAGGTATTCTCGTTGATTGGCTGATTGAGGTTCATTACAAGTTTGAGCTGATGGATGAGACCTTGTATCTTACCGTCAACCTCATTGATAGATTTTTAAGTCTTCAACCAGTGGTGAGGAAGAAACTCCAGTTGGTAGGGGTGACAGCCATGCTTCTTGCTTGCAAATATGAAGAAGTTTCAGTTCCAATCGTGGACGATCTTATTCTGATATCTGACAAGGCTTACTGCAGAAAAGAAGTGCTTGAAATGGAAAAATTAATGGTCAATACCTTACAGTTTCATATGTCTGTTCCTACTCCATATGTGTTTATGAAGAGATTTCTCAAAGCTTCTCAATCTCACCAAAAGCTTGAGCTACTTTCCTTCTTCATGGTCGAGCTTTGCCTAGTCGAGTATGAAATGCTCAAGTTCCATCCTTCTCTGTTAGCTGCGGCTGCAATTTTCACTGCTCAGTGTGCTTTAAATGGGTTCCAACAATGGAGCAAGACAAGTGAATGGTACTCTGGCTATTCAGAAGAGCAGCTTCTGGAATGCTCAATGAAGATGGTTGCTTTCCATCAGACAGCTGGTACAGGAAAGCTAACTGGAGTTCACCGGAAGTACAGTACAGCCAAGTTTGGATATGCTGCCAGAATTGAGGCGGCTAAGTTTCTATTAGAGAAAAGATTCTAA 909 40.92 MFVQHTEAMLEEIDRMDEVEMKDINEDPVEDIDSCDKNNSLAVVEYLEDLFSHYRNAEISNCASPDYMDQQSDINERMRGILVDWLIEVHYKFELMDETLYLTVNLIDRFLSLQPVVRKKLQLVGVTAMLLACKYEEVSVPIVDDLILISDKAYCRKEVLEMEKLMVNTLQFHMSVPTPYVFMKRFLKASQSHQKLELLSFFMVELCLVEYEMLKFHPSLLAAAAIFTAQCALNGFQQWSKTSEWYSGYSEEQLLECSMKMVAFHQTAGTGKLTGVHRKYSTAKFGYAARIEAAKFLLEKRF 302
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 9465763 9467303 - Bda005733.1 Bda11g00971 16079
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00971 302 ProSitePatterns Cyclins signature. 79 110 IPR006671 -
Bda11g00971 302 SMART cyclin_7 84 168 IPR013763 -
Bda11g00971 302 SMART cyclin_7 181 263 IPR013763 -
Bda11g00971 302 PANTHER CYCLINS 1 294 IPR039361 -
Bda11g00971 302 SMART Cyclin_C_2 177 294 IPR004367 -
Bda11g00971 302 Gene3D - 49 289 - -
Bda11g00971 302 Pfam Cyclin, C-terminal domain 177 291 IPR004367 -
Bda11g00971 302 SUPERFAMILY Cyclin-like 176 295 IPR036915 -
Bda11g00971 302 CDD CYCLIN 175 262 IPR013763 -
Bda11g00971 302 Gene3D - 63 175 - -
Bda11g00971 302 CDD CYCLIN 78 167 IPR013763 -
Bda11g00971 302 Pfam Cyclin, N-terminal domain 49 174 IPR006671 -
Bda11g00971 302 PANTHER CYCLIN-B2-3-RELATED 1 294 - -
Bda11g00971 302 PIRSF Cyclin_A_B_D_E 2 302 IPR039361 -
Bda11g00971 302 SUPERFAMILY Cyclin-like 38 174 IPR036915 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01560 Bda-Chr1:51495590 Bda11g00971 Bda-Chr11:9465763 1.44E-173 dispersed
Bda03g00583 Bda-Chr3:4846927 Bda11g00971 Bda-Chr11:9465763 1.06E-74 dispersed
Bda11g00971 Bda-Chr11:9465763 Bda11g01814 Bda-Chr11:53300178 2.23E-127 dispersed
Bda11g00971 Bda-Chr11:9465763 Bda11g00693 Bda-Chr11:6914682 5.73E-80 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00971 K21777 - csv:101223199 495.738