Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bda11g00971 | ATGTTTGTGCAGCACACGGAAGCAATGTTGGAAGAAATTGATAGGATGGATGAAGTTGAAATGAAAGATATAAACGAGGATCCCGTCGAGGATATAGACAGCTGCGATAAGAACAATTCACTGGCTGTTGTCGAGTACTTAGAAGATTTATTTAGCCATTATAGGAATGCTGAGATTTCAAACTGTGCTTCGCCAGATTACATGGATCAGCAATCGGATATTAATGAAAGAATGAGAGGTATTCTCGTTGATTGGCTGATTGAGGTTCATTACAAGTTTGAGCTGATGGATGAGACCTTGTATCTTACCGTCAACCTCATTGATAGATTTTTAAGTCTTCAACCAGTGGTGAGGAAGAAACTCCAGTTGGTAGGGGTGACAGCCATGCTTCTTGCTTGCAAATATGAAGAAGTTTCAGTTCCAATCGTGGACGATCTTATTCTGATATCTGACAAGGCTTACTGCAGAAAAGAAGTGCTTGAAATGGAAAAATTAATGGTCAATACCTTACAGTTTCATATGTCTGTTCCTACTCCATATGTGTTTATGAAGAGATTTCTCAAAGCTTCTCAATCTCACCAAAAGCTTGAGCTACTTTCCTTCTTCATGGTCGAGCTTTGCCTAGTCGAGTATGAAATGCTCAAGTTCCATCCTTCTCTGTTAGCTGCGGCTGCAATTTTCACTGCTCAGTGTGCTTTAAATGGGTTCCAACAATGGAGCAAGACAAGTGAATGGTACTCTGGCTATTCAGAAGAGCAGCTTCTGGAATGCTCAATGAAGATGGTTGCTTTCCATCAGACAGCTGGTACAGGAAAGCTAACTGGAGTTCACCGGAAGTACAGTACAGCCAAGTTTGGATATGCTGCCAGAATTGAGGCGGCTAAGTTTCTATTAGAGAAAAGATTCTAA | 909 | 40.92 | MFVQHTEAMLEEIDRMDEVEMKDINEDPVEDIDSCDKNNSLAVVEYLEDLFSHYRNAEISNCASPDYMDQQSDINERMRGILVDWLIEVHYKFELMDETLYLTVNLIDRFLSLQPVVRKKLQLVGVTAMLLACKYEEVSVPIVDDLILISDKAYCRKEVLEMEKLMVNTLQFHMSVPTPYVFMKRFLKASQSHQKLELLSFFMVELCLVEYEMLKFHPSLLAAAAIFTAQCALNGFQQWSKTSEWYSGYSEEQLLECSMKMVAFHQTAGTGKLTGVHRKYSTAKFGYAARIEAAKFLLEKRF | 302 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 9465763 | 9467303 | - | Bda005733.1 | Bda11g00971 | 16079 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bda11g00971 | 302 | ProSitePatterns | Cyclins signature. | 79 | 110 | IPR006671 | - | |
| Bda11g00971 | 302 | SMART | cyclin_7 | 84 | 168 | IPR013763 | - | |
| Bda11g00971 | 302 | SMART | cyclin_7 | 181 | 263 | IPR013763 | - | |
| Bda11g00971 | 302 | PANTHER | CYCLINS | 1 | 294 | IPR039361 | - | |
| Bda11g00971 | 302 | SMART | Cyclin_C_2 | 177 | 294 | IPR004367 | - | |
| Bda11g00971 | 302 | Gene3D | - | 49 | 289 | - | - | |
| Bda11g00971 | 302 | Pfam | Cyclin, C-terminal domain | 177 | 291 | IPR004367 | - | |
| Bda11g00971 | 302 | SUPERFAMILY | Cyclin-like | 176 | 295 | IPR036915 | - | |
| Bda11g00971 | 302 | CDD | CYCLIN | 175 | 262 | IPR013763 | - | |
| Bda11g00971 | 302 | Gene3D | - | 63 | 175 | - | - | |
| Bda11g00971 | 302 | CDD | CYCLIN | 78 | 167 | IPR013763 | - | |
| Bda11g00971 | 302 | Pfam | Cyclin, N-terminal domain | 49 | 174 | IPR006671 | - | |
| Bda11g00971 | 302 | PANTHER | CYCLIN-B2-3-RELATED | 1 | 294 | - | - | |
| Bda11g00971 | 302 | PIRSF | Cyclin_A_B_D_E | 2 | 302 | IPR039361 | - | |
| Bda11g00971 | 302 | SUPERFAMILY | Cyclin-like | 38 | 174 | IPR036915 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bda01g01560 | Bda-Chr1:51495590 | Bda11g00971 | Bda-Chr11:9465763 | 1.44E-173 | dispersed | |
| Bda03g00583 | Bda-Chr3:4846927 | Bda11g00971 | Bda-Chr11:9465763 | 1.06E-74 | dispersed | |
| Bda11g00971 | Bda-Chr11:9465763 | Bda11g01814 | Bda-Chr11:53300178 | 2.23E-127 | dispersed | |
| Bda11g00971 | Bda-Chr11:9465763 | Bda11g00693 | Bda-Chr11:6914682 | 5.73E-80 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bda11g00971 | K21777 | - | csv:101223199 | 495.738 |