Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00976 ATGGAGTGGCAGAATCAGCAGCAAAACCAAGCAGAGCAACTGCCAATGCAACTGCCGATTGATCAATTGCAGAACCCAGATGGGTTGTACGTCAAAGTGATGACGGACGAGCAAATGGAGCTTCTCCGGCGACAGATCTCCGTCTACGCTACCATTTGTGAGCAGCTTGTCGAGATGCACAAGGCGATGACTGCCCAACAGGACATAACAGGAATGAGGTTGGGGAATCTCTACTGTGATCCAATGATGGCATCTAGCGGACACAAGATTACTGCTCGACAAAGGTGGACTCCAACTCCCGTGCAGCTTCAGATGCTGGAGCGTATTTTTGACGAAGGAAATGGCACTCCAAGCAAGCAGAAGATTAGAGAGATAACTGTAGAGCTCTCACAACATGGCCAAATCTCCGAAGCAAATGTGTATAATTGGTTCCAAAACAGAAGAGCTCGTTCGAAAAGAAAGCAGTCGGTTTCTATCCAAAACAATGCAGATTCAGAAGTTGAAACCGAAGTCGAATCTCCAAAGGAAGAGAAGACGAAGCTGGTAAGCGCCCGATCATTTGAGAATCTCGGACAGAGTACTGGTGATATTTATAACCAGAAATCAGAGTTAAATGCCAAAATGCAGTACTTGGATGCACAATCGAATAAAGGGGAGCCCCTTTTTCACTTCAGATCTTGTAATTCAGGCCATATGAGTGCCGTGCCGAGTCAAAGTATGTGGACGGATATGACTATCAACAAATTGGAAATTCCGGGTTACAGCTACAATCCTTGTGACGGATATGACCTGATTGAGTGA 801 45.82 MEWQNQQQNQAEQLPMQLPIDQLQNPDGLYVKVMTDEQMELLRRQISVYATICEQLVEMHKAMTAQQDITGMRLGNLYCDPMMASSGHKITARQRWTPTPVQLQMLERIFDEGNGTPSKQKIREITVELSQHGQISEANVYNWFQNRRARSKRKQSVSIQNNADSEVETEVESPKEEKTKLVSARSFENLGQSTGDIYNQKSELNAKMQYLDAQSNKGEPLFHFRSCNSGHMSAVPSQSMWTDMTINKLEIPGYSYNPCDGYDLIE 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9505207 9506969 + Bda005739.1 Bda11g00976 16084
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00976 266 PANTHER - 1 263 - -
Bda11g00976 266 SMART HOX_1 91 158 IPR001356 GO:0003677
Bda11g00976 266 Gene3D - 95 159 - -
Bda11g00976 266 ProSiteProfiles 'Homeobox' domain profile. 89 154 IPR001356 GO:0003677
Bda11g00976 266 MobiDBLite consensus disorder prediction 152 171 - -
Bda11g00976 266 CDD homeodomain 93 155 IPR001356 GO:0003677
Bda11g00976 266 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 263 IPR044559 GO:0003700
Bda11g00976 266 Pfam Homeodomain 93 153 IPR001356 GO:0003677
Bda11g00976 266 SUPERFAMILY Homeodomain-like 92 157 IPR009057 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00324 Bda11g00976 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00976 Bda-Chr11:9505207 Bda11g01811 Bda-Chr11:53266261 4.66E-87 dispersed
Bda11g00976 Bda-Chr11:9505207 Bda03g00324 Bda-Chr3:2762501 2.81E-128 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16641 PF00046 Homeodomain 7.80E-18 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00976 - - bhj:120085747 348.591