Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g00979 ATGGCTGCTAGTATGGATTTTTCACCTACATTTACATTAAGAGAGAGTGGTTACAATAAGACAAACGGTTCAGCCGCAGAAGCTGAGGATGCCAGTGAGTTGAACAATATAAAACAAATCAACAATGGGAAACCTCCTCGGCACCTCTCTGTGAAACGCCATAGTATTAGCTCTGTGGGGCTTCTTGGCCCGGCTGATTTGAGTTTGGATCCTGCCATTGATGACAGTAAGTCACCTGATGAAAAGAGAGAATTTATACCTGTTTTCAGATCGGGAAGTTGTGCTGAAAGAGGACCTAAACGGTACATGGAGGATGAACACATTTGTATAGATGATCTCTACAAACATATAGGTTCAATCGATGATACCATATCTCCTTTGGCTTTTTATGGGGTGTTTGATGGTCATGGTGGTACAGATGCAGCATCATTTGTGAGAAACAATATCCTCAGATTCACAATTGAGGATTCTCATTTTCCAGTTTGTATGGAGAAAGCAATTAAGAGTGCTTTTCGGAAAGCTGATTATGCGTTTGCAGACACTAGTTCACTAGATGTTTCCTCCGGTACGACGGCCCTAACTGTCTTCATCTTGGGGAGATCAATGATAATTGCCAATGCTGGTGATTGTCGAGCTGTTTTGGGAAGGCGGGGCAGAGCAGTCGAGATGTCGAAAGACCACAAACCCAACTGCATGCACGAAAGAAGGAGAATTGAGAAACTCGGTGGAGTAATTTATGACGGCTATCTCAATGGCCAGCTATCTGTTTCTAGGGCCATAGGAGATTGGCACATGAAAGGTGCCAAGGGTCAGCCATGTCCATTGAGTGCTGAGCCGGAGTTGCAGGAAATTGTCCTGACCGAGGATGACGAGTTTCTAATATTGGGATGCGATGGGCTGTGGGACGTAATGAGCAGTCAGTGCGCTGTTACCATGGCAAGAAAAGAGCTGATGCTTCACAATGACCCTGAAAGATGCTCAAGAGAGTTGGTGAGTGAGGCCCTCAAGCGCAATACTTGTGATAATTTGACAGTCATTTTGATCTGTTTTTCTCCTCACCCTCCCCCTCGGATAGAGCTACCTCCATCTCGAGTAAGGCGGAGTATTTCAGCCGAGGGTCTAAACTTGTTGAAAGGCATACTAGACTCTAGTTGA 1155 45.11 MAASMDFSPTFTLRESGYNKTNGSAAEAEDASELNNIKQINNGKPPRHLSVKRHSISSVGLLGPADLSLDPAIDDSKSPDEKREFIPVFRSGSCAERGPKRYMEDEHICIDDLYKHIGSIDDTISPLAFYGVFDGHGGTDAASFVRNNILRFTIEDSHFPVCMEKAIKSAFRKADYAFADTSSLDVSSGTTALTVFILGRSMIIANAGDCRAVLGRRGRAVEMSKDHKPNCMHERRRIEKLGGVIYDGYLNGQLSVSRAIGDWHMKGAKGQPCPLSAEPELQEIVLTEDDEFLILGCDGLWDVMSSQCAVTMARKELMLHNDPERCSRELVSEALKRNTCDNLTVILICFSPHPPPRIELPPSRVRRSISAEGLNLLKGILDSS 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9516047 9517894 - Bda005742.1 Bda11g00979 16087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g00979 384 CDD PP2Cc 89 350 IPR001932 -
Bda11g00979 384 MobiDBLite consensus disorder prediction 9 43 - -
Bda11g00979 384 SUPERFAMILY PP2C-like 84 352 IPR036457 -
Bda11g00979 384 Gene3D - 71 353 IPR036457 -
Bda11g00979 384 ProSitePatterns PPM-type phosphatase domain signature. 129 137 IPR000222 GO:0043169
Bda11g00979 384 PANTHER PROTEIN PHOSPHATASE 2C 1 372 IPR015655 GO:0004722|GO:0006470
Bda11g00979 384 PANTHER PROTEIN PHOSPHATASE 2C 27-RELATED 1 372 - -
Bda11g00979 384 Pfam Protein phosphatase 2C 91 342 IPR001932 -
Bda11g00979 384 MobiDBLite consensus disorder prediction 1 50 - -
Bda11g00979 384 ProSiteProfiles PPM-type phosphatase domain profile. 90 350 IPR001932 -
Bda11g00979 384 SMART PP2C_4 80 348 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda03g00327 Bda11g00979 CCT
Bda03g00327 Bda11g00979 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda04g00698 Bda-Chr4:55785709 Bda11g00979 Bda-Chr11:9516047 1.31E-104 dispersed
Bda05g00129 Bda-Chr5:6002537 Bda11g00979 Bda-Chr11:9516047 4.54E-31 dispersed
Bda11g00979 Bda-Chr11:9516047 Bda13g01275 Bda-Chr13:35110645 5.03E-112 dispersed
Bda11g00979 Bda-Chr11:9516047 Bda03g00327 Bda-Chr3:2778851 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g00979 K14803 - qsu:112023621 616.305