Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g00985 | ATGACCCGTCCTCGTAGGGTTCTAGCCGGGGATGCGAATCCCCCTGCGAACGATGACCATCAGCTTCCTTCCGGTCAAAATGACTCAGACGTCGTCATAATACTCGCCGCTCTGCTCTGCGCCTTAATCTGCGTTCTTGGGCTCATAGCCGTAGCTCGTTGTACCTGGATCCGACGCCTATCCGGTAACCGTGCCTTAGCTTCTGCCTCTACCACAGCTAATTCGTCTGGGCCTTCTTCAAACAAAGGGCTTAAGAAGAAAATCTTGAGGTCTCTCCCTAAAGCCACTTTCAACGGTGAGTCCGATTACCAGCTCTCGGATTGCGCGATCTGCCTCACCGAGTTCGCCATTGGCGATGAAATCCGTGTGCTTCCGCAGTGTGGCCATGTTTTCCACCTCTCCTGCATCGATACATGGTTTCGGTCGCACTCATCCTGCCCTTCTTGCCGAAAGGTTCTGGCGGTGTCGAGGTGCCAGAAGTGCGGTGATTTGTCAGCGAGCTCAAGCACTGTTCCAGCAAGTGAAGCCAGATCAAAGGAGAGACAAGATGATGAAAATAGGTTCTTACCCTAG | 573 | 53.05 | MTRPRRVLAGDANPPANDDHQLPSGQNDSDVVIILAALLCALICVLGLIAVARCTWIRRLSGNRALASASTTANSSGPSSNKGLKKKILRSLPKATFNGESDYQLSDCAICLTEFAIGDEIRVLPQCGHVFHLSCIDTWFRSHSSCPSCRKVLAVSRCQKCGDLSASSSTVPASEARSKERQDDENRFLP | 190 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9555561 | 9556133 | + | Bda005748.1 | Bda11g00985 | 16093 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g00985 | 190 | SMART | ring_2 | 108 | 149 | IPR001841 | - | |
Bda11g00985 | 190 | Pfam | Ring finger domain | 107 | 150 | IPR001841 | - | |
Bda11g00985 | 190 | PANTHER | RING-H2 FINGER PROTEIN ATL8 | 1 | 184 | - | - | |
Bda11g00985 | 190 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 155 | IPR013083 | - | |
Bda11g00985 | 190 | SMART | FANCL_C_2 | 104 | 158 | - | - | |
Bda11g00985 | 190 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 1 | 184 | - | - | |
Bda11g00985 | 190 | SUPERFAMILY | RING/U-box | 91 | 155 | - | - | |
Bda11g00985 | 190 | MobiDBLite | consensus disorder prediction | 176 | 190 | - | - | |
Bda11g00985 | 190 | MobiDBLite | consensus disorder prediction | 163 | 190 | - | - | |
Bda11g00985 | 190 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Bda11g00985 | 190 | CDD | RING-H2_PA-TM-RING | 107 | 150 | - | - | |
Bda11g00985 | 190 | ProSiteProfiles | Zinc finger RING-type profile. | 108 | 150 | IPR001841 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g00985 | Bda-Chr11:9555561 | Bda11g01372 | Bda-Chr11:16639010 | 3.53E-29 | dispersed | |
Bda04g00171 | Bda-Chr4:5101650 | Bda11g00985 | Bda-Chr11:9555561 | 6.30E-17 | transposed | |
Bda06g00750 | Bda-Chr6:10375028 | Bda11g00985 | Bda-Chr11:9555561 | 2.51E-08 | transposed | |
Bda11g01819 | Bda-Chr11:53376368 | Bda11g00985 | Bda-Chr11:9555561 | 1.57E-17 | transposed | |
Bda14g00192 | Bda-Chr14:1369540 | Bda11g00985 | Bda-Chr11:9555561 | 2.59E-33 | transposed | |
Bda14g00977 | Bda-Chr14:7903613 | Bda11g00985 | Bda-Chr11:9555561 | 3.16E-16 | transposed | |
Bda11g00985 | Bda-Chr11:9555561 | Bda03g00332 | Bda-Chr3:2799378 | 4.31E-94 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g00985 | - | - | csv:101207021 | 220.32 |