Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01036 | ATGTATTTCTGCAGAACTAATAGTGGTACATTCATGGACGGTGATCTTCGCATCAATCGGGAGGGAGTTCAAATTGTCTGTCAGACTCAGAAAGAAGCTGAAAATTCATGTCAACTCAACCCTTCAGACAGCCAGTGGAGTTTGGAAGACATGGATACAGTTAAAGTCATCGGAAAAGGTAACGGCGGAGTTGTTCAGTTGGTGAAGCACAAAGCCACCGGCCAATTTTTCGCATTGAAGGTTATTCAAATGAAGATCGAGGAGAGTTATCGGAAACAGATAGCGAGGGAACTGAAAATTAATCAGTCAGCTCGAAGCCCTTATGTGGTGGTCTGTTATCAGTCTTTCTACTACAATGGAGCCATTTCAATTATCTTAGAGTACATGGATGGAGGGAGTCTAGCAGATTTTCTGAAACAAGTTAAGTCGATTCCTGAGGAATATCTTGCTGCAATATGTAAACAGGTGCTGAGGGGACTTTTGTACCTTCACCATGAAATGCACATAATTCACAGGGACTTGAAGCCTTCAAATCTGCTAATAAATCACAAAGGAGAAGTCAAGATTAGTGATTTTGGTGTGAGCAGAATAATGGCAAGCACCTCTGGACAGGCAAATACCTTTCTTGGAACATGCAACTACATGTCTCCAGAGAGGATTGGTGGAGAAAGATATGACAAGAAAAGTGACATTTGGAGCCTGGGACTGGTTTTACTGGAGTGTGCAATTGGTCAGTTTCCTTATTCTCCACCAGAGGAAGGTGGAAGCTTGGATAACTTCTTTGATATTATGCAAGTCATTGTTAATGGACCTCCTCCTTCTGCTCCTTCTCCCAGATTTTCTCCGCAGTTCTGCTCCTTCATTTCTGCATGCTTAGAAAAAGAGCCGAAAGATAGACTCTCGGCTCGTGAGCTTATGGTGCATCCTTTTGTGAATGCATATGAAGACTTGGATGTGGATCTATCATCATACTTTGCAGACGCCGGATCTCCATTTCCACCCTCTTAG | 1008 | 42.86 | MYFCRTNSGTFMDGDLRINREGVQIVCQTQKEAENSCQLNPSDSQWSLEDMDTVKVIGKGNGGVVQLVKHKATGQFFALKVIQMKIEESYRKQIARELKINQSARSPYVVVCYQSFYYNGAISIILEYMDGGSLADFLKQVKSIPEEYLAAICKQVLRGLLYLHHEMHIIHRDLKPSNLLINHKGEVKISDFGVSRIMASTSGQANTFLGTCNYMSPERIGGERYDKKSDIWSLGLVLLECAIGQFPYSPPEEGGSLDNFFDIMQVIVNGPPPSAPSPRFSPQFCSFISACLEKEPKDRLSARELMVHPFVNAYEDLDVDLSSYFADAGSPFPPS | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10100335 | 10103285 | + | Bda007499.1 | Bda11g01036 | 16144 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01036 | 335 | Gene3D | Phosphorylase Kinase; domain 1 | 20 | 130 | - | - | |
Bda11g01036 | 335 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 5 | 330 | - | - | |
Bda11g01036 | 335 | Gene3D | Transferase(Phosphotransferase) domain 1 | 131 | 330 | - | - | |
Bda11g01036 | 335 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 316 | IPR011009 | - | |
Bda11g01036 | 335 | CDD | PKc_MAPKK_plant_like | 49 | 315 | - | - | |
Bda11g01036 | 335 | ProSiteProfiles | Protein kinase domain profile. | 51 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01036 | 335 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 169 | 181 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g01036 | 335 | PANTHER | MAP KINASE KINASE | 5 | 330 | - | - | |
Bda11g01036 | 335 | SMART | serkin_6 | 51 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01036 | 335 | Pfam | Protein kinase domain | 53 | 311 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01036 | 335 | ProSitePatterns | Protein kinases ATP-binding region signature. | 57 | 80 | IPR017441 | GO:0005524 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda02g00383 | Bda11g01036 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02038 | Bda-Chr1:56647120 | Bda11g01036 | Bda-Chr11:10100335 | 1.86E-142 | dispersed | |
Bda07g01729 | Bda-Chr7:32401743 | Bda11g01036 | Bda-Chr11:10100335 | 6.07E-72 | dispersed | |
Bda11g01036 | Bda-Chr11:10100335 | Bda11g01809 | Bda-Chr11:53177394 | 3.47E-69 | dispersed | |
Bda11g01036 | Bda-Chr11:10100335 | Bda02g00383 | Bda-Chr2:44203814 | 8.61E-168 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69918 | PF00069 | Pkinase | 2.20E-70 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01036 | K20603 | - | cit:102625262 | 489.189 |