Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01037 ATGGTGGCAGTTAACGGCGTTCCCGGCCGTAGCAGTGGCGGCGGAAGCCGACGCGCGGTCCAATGGGCCGTGGAGAATCTCTTGCCCGGTGCTGGTCGTCTCCTCTTAGTTCATGTCATGCCCAAAATTACTTCGATTCCCACTCCATTGGGAGATGGAGTCCCCGTTACGGCTCTTGATGCGAACGTGGTTGCACTTTATACGCAAGACATGAAAGAGAAATTCGATCAAATTTTTGTCCCGTTTAAGAAGCTTTGCTGGGAAAACAAAGTTGAAACTCTGGTGCTTGAAGATGACAACCCAGCTACAGCGCTTGTAAGATATATATCTGAGTCTGATATCAAAACATTGGTGTTGGGTTCTTGTTCTTCAAATTTCATGACAAGGAAGCTTAAAGGACCTGGAGTACCAACTACAGTTCTGAGAAATGCTCCAAATAGTTGTAATATCTTCATTATATCAAAGCGTAGAATCATTACAAGAACCACAAGTTCCTCGCCAACCAGTGAGACCGATTCTCGGCAGTGCATACCAAGTGAAAGTAACTACGAAGAAGGTGCTGATAGGTTCTGTTCTTCATCTGCAGAATCAGAGGGCAGTAGCAGAACTGTATATTCAGAAAGGATTCATGATGACTTGGAAAACAAACAAGAGATTGATTCAAGTAAATTAGGTTTCGCAGCCTCCGAAACTGAGCAGGTAGATATGCAGCGTGAGATTGAGTCACTGCAGCTAGATTTAGAAAACACTGTTGCCATGTATAAACGTGCTTGTGAAGAACTGGTCCATACCCAGAATAAGGTGCAGTCACTTTCCTCTGAATGGCATGAAGAAACAAGAAGAACGAAATCTGCCATGGAAAGAGAAGAAGATTCAAGGAAAATTGCTGCTGAAGAAAAAGCTAAGCATTTAGAAGCCATGAAGGCACTAGAGGAAGCAAAAGCTTTACTGGCTAAAGAGGCATATGAAAGGCAGTTGGCCGAACAGAATGCCCTAAAAATATCCTTGGAAAAGCAAAGAATTGTTGATACTCTGATCTCTTCTGATAAAAGGTACAGAAGGTATACTGGGGAGGAAATAGAAATTGCAACGGATTTCTTCAGCGAGAGTAATATGATTGGTCAGGGAGGATATGGGAAGGTTTATAAATGCTATCTTGATGGTACACTAGTGGCTGTTAAGGTTCTTCAACCTGGTGAATTTGACAAGAAAAATGAGTTTCTGAAAGAGGTTGAAGTTTTAAGCCAAATACGCCATCCACACGTGGTTTTACTCCTCGGAGCTTGTCCAGAGAGAGGTTGTCTGGTTTATGAATTCTTGGAAAATGGAAGTCTGGACGAGTATATCTTACAGCAGAGGAGGAAACCACCACTGCCATGGCTTGTTAGATTCAGGATAATTCATCAAGTAGCTTGTGGACTTTCTTTCTTACACAACTCGAAGCCGGAACCTATAATACATCGAGATCTAAAGCCGGGCAATATCTTGTTGGACAGAAACTATGTTGTCAAAATTGCAGATGTTGGACTGGCTAAAATCACTGGAGATATAGTGCCTGATAATATAACAGAGTATAAAAATTCTATTATATTTGGTACACTTCACTACATGGACCCCGAGTATCAGAGAACTGGCACGGTTCGTCCAAAATCTGATTTATATGCTTTTGGTGTAATAGTTCTCCAAATGCTGACAGGCCGTCGTCCTCACGGCTTAATTTTAGCAGTAGAGAATGCTATTTCAAGTGGGTCCCTGGCAGATATTTTAGATAAGTCAGTTTCAGATTGGCCTCTTTCTGAAACAGAAGAATTGGCCAAAATTGCTCTGGGATGCACAAAGCTTAGATGCAGGGATCGGCCTGATTTGGACGCAGAGGTTATGCCCATCCTCAATACAATTTTGAACGTTGCAGAGTTTAGTCAGAAAATTCTCGGATATGTCCCAAGCCACTACCTCTGTCCAATCCTTCAGGAAGTAATGGAGAAGCCACATATTGCTGCCGATGGGTTTACCTACGAATACGAGGCGATAAAGGCGTGGCTGGATAGACATGAAGTATCACCGGTGACAAAGCTTAGACTTCAGCATTCTATGGTAACACCAAATCACACTTTAAGATCTGCCATACAAGAATGGAAGTCATCTTTGAAACTTCCCTACGCTCAGTTTGGATAA 2175 42.62 MVAVNGVPGRSSGGGSRRAVQWAVENLLPGAGRLLLVHVMPKITSIPTPLGDGVPVTALDANVVALYTQDMKEKFDQIFVPFKKLCWENKVETLVLEDDNPATALVRYISESDIKTLVLGSCSSNFMTRKLKGPGVPTTVLRNAPNSCNIFIISKRRIITRTTSSSPTSETDSRQCIPSESNYEEGADRFCSSSAESEGSSRTVYSERIHDDLENKQEIDSSKLGFAASETEQVDMQREIESLQLDLENTVAMYKRACEELVHTQNKVQSLSSEWHEETRRTKSAMEREEDSRKIAAEEKAKHLEAMKALEEAKALLAKEAYERQLAEQNALKISLEKQRIVDTLISSDKRYRRYTGEEIEIATDFFSESNMIGQGGYGKVYKCYLDGTLVAVKVLQPGEFDKKNEFLKEVEVLSQIRHPHVVLLLGACPERGCLVYEFLENGSLDEYILQQRRKPPLPWLVRFRIIHQVACGLSFLHNSKPEPIIHRDLKPGNILLDRNYVVKIADVGLAKITGDIVPDNITEYKNSIIFGTLHYMDPEYQRTGTVRPKSDLYAFGVIVLQMLTGRRPHGLILAVENAISSGSLADILDKSVSDWPLSETEELAKIALGCTKLRCRDRPDLDAEVMPILNTILNVAEFSQKILGYVPSHYLCPILQEVMEKPHIAADGFTYEYEAIKAWLDRHEVSPVTKLRLQHSMVTPNHTLRSAIQEWKSSLKLPYAQFG 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10117529 10121480 - Bda007501.1 Bda11g01037 16145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01037 724 Pfam Universal stress protein family 16 147 IPR006016 -
Bda11g01037 724 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 200 715 - -
Bda11g01037 724 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 2 204 - -
Bda11g01037 724 ProSitePatterns Serine/Threonine protein kinases active-site signature. 485 497 IPR008271 GO:0004672|GO:0006468
Bda11g01037 724 SMART Ubox_2 650 712 IPR003613 GO:0004842|GO:0016567
Bda11g01037 724 Pfam Protein tyrosine and serine/threonine kinase 370 623 IPR001245 GO:0004672|GO:0006468
Bda11g01037 724 Gene3D Phosphorylase Kinase; domain 1 346 439 - -
Bda11g01037 724 CDD RING-Ubox_WDSUB1_like 651 691 - -
Bda11g01037 724 Coils Coil 293 339 - -
Bda11g01037 724 Pfam U-box domain 647 714 IPR003613 GO:0004842|GO:0016567
Bda11g01037 724 PANTHER OS02G0152300 PROTEIN 200 715 - -
Bda11g01037 724 PANTHER OS02G0152300 PROTEIN 2 204 - -
Bda11g01037 724 ProSiteProfiles U-box domain profile. 646 719 IPR003613 GO:0004842|GO:0016567
Bda11g01037 724 ProSitePatterns Protein kinases ATP-binding region signature. 373 394 IPR017441 GO:0005524
Bda11g01037 724 CDD STK_N 19 155 - -
Bda11g01037 724 Gene3D HUPs 1 153 IPR014729 -
Bda11g01037 724 SUPERFAMILY RING/U-box 644 717 - -
Bda11g01037 724 SUPERFAMILY Protein kinase-like (PK-like) 349 622 IPR011009 -
Bda11g01037 724 MobiDBLite consensus disorder prediction 273 293 - -
Bda11g01037 724 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 646 718 IPR013083 -
Bda11g01037 724 Gene3D Transferase(Phosphotransferase) domain 1 440 643 - -
Bda11g01037 724 Coils Coil 254 274 - -
Bda11g01037 724 SMART serkin_6 367 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01037 724 ProSiteProfiles Protein kinase domain profile. 367 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01037 724 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 145 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g01340 Bda11g01037 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g01505 Bda-Chr9:46821234 Bda11g01037 Bda-Chr11:10117529 1.27E-100 dispersed
Bda10g00057 Bda-Chr10:1155318 Bda11g01037 Bda-Chr11:10117529 1.74E-55 dispersed
Bda11g00250 Bda-Chr11:2944523 Bda11g01037 Bda-Chr11:10117529 3.75E-83 dispersed
Bda11g00887 Bda-Chr11:8708552 Bda11g01037 Bda-Chr11:10117529 7.25E-17 dispersed
Bda11g01037 Bda-Chr11:10117529 Bda13g01593 Bda-Chr13:39499540 3.43E-135 dispersed
Bda11g01037 Bda-Chr11:10117529 Bda06g00764 Bda-Chr6:10637430 1.13E-156 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69919 PF07714 PK_Tyr_Ser-Thr 3.00E-42 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01037 - - cpep:111805862 885.945