Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01093 | ATGGCTGACTCGTTCAACTCGTCTTCCTCGCCTAGCTCTTCTATTTCGCCTGGACCCGACCCGAAGAAGGGTAAGCGAGCCCGGGAAAGTGACGGCAAGCACCCGGTTTACAGAGGGGTACGAATGCGGGCTTGGGGAAAATGGGTATCCGAAATCCGGGAACCGCGAAAGAAGAACCGGATTTGGCTCGGAACCTTCTCGACGCCGGAAATGGCGGCTCGAGCTCACGACGTCGCCGCTTTGACAATCAAAGGCAAATCCGCTATTCTCAACTTCCCGGCACTTGCTGGAATGCTTCCCCAACCGGCTTCGAACTCTCCCCGCGACGTTCAAGCCGCCGCTGCTTTGGCCGCTTCGATGGAGGTTCTTCCGGCGACTCCACCGGAATCCTATCCGCCTCCACCGTCTGAACAGTCGTCTTCTTCCTCCTCATTCGACATTCCTTCTCCGGAGGAACTCAGCGCCATCGTAGAGCTTCCGAGCTTAGGAACCAGCTACGAATCGCCCGGGTCAGAATTCGTGTTTCTGGACTCGGAAGATCGGTGGCTCTACGCAGAGGACTACGAATACTTCACCCATCAGATATCAGAGACGGAAACAGACAGCTTCCAATTTTTCTTGTGGCGCCATTAA | 633 | 55.77 | MADSFNSSSSPSSSISPGPDPKKGKRARESDGKHPVYRGVRMRAWGKWVSEIREPRKKNRIWLGTFSTPEMAARAHDVAALTIKGKSAILNFPALAGMLPQPASNSPRDVQAAAALAASMEVLPATPPESYPPPPSEQSSSSSSFDIPSPEELSAIVELPSLGTSYESPGSEFVFLDSEDRWLYAEDYEYFTHQISETETDSFQFFLWRH | 210 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10692654 | 10693286 | - | Bda007562.1 | Bda11g01093 | 16201 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01093 | 210 | SMART | rav1_2 | 36 | 99 | IPR001471 | GO:0003700|GO:0006355 | |
Bda11g01093 | 210 | ProSiteProfiles | AP2/ERF domain profile. | 36 | 93 | IPR001471 | GO:0003700|GO:0006355 | |
Bda11g01093 | 210 | MobiDBLite | consensus disorder prediction | 21 | 36 | - | - | |
Bda11g01093 | 210 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 3-LIKE | 6 | 194 | - | - | |
Bda11g01093 | 210 | CDD | AP2 | 37 | 95 | IPR001471 | GO:0003700|GO:0006355 | |
Bda11g01093 | 210 | MobiDBLite | consensus disorder prediction | 124 | 148 | - | - | |
Bda11g01093 | 210 | PRINTS | Ethylene responsive element binding protein signature | 37 | 48 | IPR001471 | GO:0003700|GO:0006355 | |
Bda11g01093 | 210 | PRINTS | Ethylene responsive element binding protein signature | 59 | 75 | IPR001471 | GO:0003700|GO:0006355 | |
Bda11g01093 | 210 | Gene3D | AP2/ERF domain | 36 | 94 | IPR036955 | GO:0003700|GO:0006355 | |
Bda11g01093 | 210 | MobiDBLite | consensus disorder prediction | 1 | 36 | - | - | |
Bda11g01093 | 210 | SUPERFAMILY | DNA-binding domain | 36 | 94 | IPR016177 | GO:0003677 | |
Bda11g01093 | 210 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED | 6 | 194 | - | - | |
Bda11g01093 | 210 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Bda11g01093 | 210 | Pfam | AP2 domain | 35 | 85 | IPR001471 | GO:0003700|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g02052 | Bda-Chr1:56783535 | Bda11g01093 | Bda-Chr11:10692654 | 3.99E-93 | dispersed | |
Bda02g00418 | Bda-Chr2:44826486 | Bda11g01093 | Bda-Chr11:10692654 | 2.07E-62 | dispersed | |
Bda09g01132 | Bda-Chr9:41989133 | Bda11g01093 | Bda-Chr11:10692654 | 3.64E-59 | dispersed | |
Bda11g00829 | Bda-Chr11:8213516 | Bda11g01093 | Bda-Chr11:10692654 | 5.37E-56 | dispersed | |
Bda11g01093 | Bda-Chr11:10692654 | Bda13g00507 | Bda-Chr13:6045528 | 1.59E-82 | dispersed | |
Bda01g02051 | Bda-Chr1:56777298 | Bda11g01093 | Bda-Chr11:10692654 | 1.68E-74 | wgd | |
Bda11g01093 | Bda-Chr11:10692654 | Bda02g00425 | Bda-Chr2:44879849 | 2.51E-31 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16655 | PF00847 | AP2 | 1.30E-13 | CL0081 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01093 | K09286 | - | jre:108986620 | 232.646 |