Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01097 ATGGGGGAAGGAGAGGCTGCTCCAGAAAATTCTCAGCCAGATGTTGCGGCATCAAGTGACGCTGCTTCGTCCGATATAACAGCTAAGAAGCTCGCGAGGCAGCTGGATTTTAGGATGTCAGCGAGTGTGGTCTTGCCGGAACATCCCCACCCTCAATCTCAAACACAATTGCAGTCGCGCTCTCAGTTGCCACTTGTGGCAGTGCCTCAGAGCCAGGCTCAATTGCCACCGCCGCCTCAGTCGCAGCCACAAATGGTGGTTATACCTGTATCTCCATCCCCAAGGTTCCTCTTTTGTTTTTTGCCCATCAGAGAACCAGATTCCCCAAAGTCGAGAGCAAGATCCAACATTGAAGCAAAAGATTGTACTCCGAAGAAGCAAAGACAGTGTAATTGTAAACACTCCCGATGCTTAAAGTTGTATTGTGAGTGTTTTGCTTCTGGAATATACTGTGACGGTTGTAACTGCATAAACTGCTATAATAATGTTGAAAATGAAGCTGCCAGGAGAGAAGCAGTTGAAGCGACTCTGGAACGTAATCCAAATGCGTTTCGACCAAAAATTGCTAACAGTCCGCATGGGACGACACGTGATAATAGGGTGGAAGCTGGGGAGGTTCTAATGTTGGGAAAGCACAACAAAGGCTGCCATTGCAAGAAATCAGGGTGCCTAAAAAAGTATTGTGAGTGTTTCCAAGCCAATATTCTCTGCTCTGAAAACTGTAAATGCATGGACTGCAAAAACTTTGAGGGAAGTGAAGAGAGACAAGCTCTATTCCACGGGGACCATGGGAACAATCTTGCATACATACAGCAGGCAGCTAATGCTGCCATAACTGGAGCTATTGGATCCTCTGGATATGCATCCCCGCCAGTGTCAAAGAAAAGAAAAGGACAAGAGCTTCTTTTTGGCCACACACCCAAAGATCCAGCCATTCATCGGTTGGCACAATTTCAACAGGAAAATCAAATCAGAACTTCTATAGCTTCCTTGCCTTCAATCCCTGCTACTCGTGATGGTTCCAATGCGGCATTGGACCCTTCAAAGTTCACTTACAGATCGTTGTTAGCAGACATCATCCAACCACAGGATTTGAAGGAGCTTTGCTCTGTGTTAGTCGTTCTATCTAATCAAAGGAACGCTGCAGAAAGAGGGGCAGACAATCAAATAGAAACTTCCCTTGCTTCCTCAACTCATGACAGGCTGCAGAATGAAAAAAATTCTGCTGAGAAAGCTATCAATGGTGATTGTTCAAGCGCAAACCAGGATAATATAATCAAGCCCTATAATTCCAATTCAGAAGAAGCGAATGTACCAAAAGGACGGCCTATGTCTCCCGGAACTTTAGCTTTGATGTGCGATGAAGAAGACACAATGTTTATGCAACCTGCTTTCCCCAATGGTATAGTTGGTAATAGTTGCTCTACGTCATCACAAATGCCTTACGAACAAGACCTGTCGGAAGTCTTCAGAGAACAGGAACGAGCTGTCTTGACAAAGTTTCGAGATTGTCTCAATAGGCTCATAACTTTCGGCAAGATAAAAGGCAAGTTATTAATTTCTGATCTTGGTAAGTTAATAATTGAACTTTACAGATATCCTTTGGGGGCTAATTTTATACAGTTTCTCCATGGTCGTCTTTCTTTTGTTGTTATTTTCTTAATAAATTTCCCTGTTTGA 1680 43.93 MGEGEAAPENSQPDVAASSDAASSDITAKKLARQLDFRMSASVVLPEHPHPQSQTQLQSRSQLPLVAVPQSQAQLPPPPQSQPQMVVIPVSPSPRFLFCFLPIREPDSPKSRARSNIEAKDCTPKKQRQCNCKHSRCLKLYCECFASGIYCDGCNCINCYNNVENEAARREAVEATLERNPNAFRPKIANSPHGTTRDNRVEAGEVLMLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFEGSEERQALFHGDHGNNLAYIQQAANAAITGAIGSSGYASPPVSKKRKGQELLFGHTPKDPAIHRLAQFQQENQIRTSIASLPSIPATRDGSNAALDPSKFTYRSLLADIIQPQDLKELCSVLVVLSNQRNAAERGADNQIETSLASSTHDRLQNEKNSAEKAINGDCSSANQDNIIKPYNSNSEEANVPKGRPMSPGTLALMCDEEDTMFMQPAFPNGIVGNSCSTSSQMPYEQDLSEVFREQERAVLTKFRDCLNRLITFGKIKGKLLISDLGKLIIELYRYPLGANFIQFLHGRLSFVVIFLINFPV 559
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10752029 10756774 + Bda007567.1 Bda11g01097 16205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01097 559 Coils Coil 160 180 - -
Bda11g01097 559 PANTHER TESMIN/TSO1-RELATED 21 517 IPR028307 -
Bda11g01097 559 MobiDBLite consensus disorder prediction 47 61 - -
Bda11g01097 559 MobiDBLite consensus disorder prediction 1 27 - -
Bda11g01097 559 ProSiteProfiles CRC domain profile. 126 251 IPR005172 -
Bda11g01097 559 MobiDBLite consensus disorder prediction 382 443 - -
Bda11g01097 559 MobiDBLite consensus disorder prediction 382 438 - -
Bda11g01097 559 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 214 248 IPR005172 -
Bda11g01097 559 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 128 162 IPR005172 -
Bda11g01097 559 MobiDBLite consensus disorder prediction 42 61 - -
Bda11g01097 559 SMART CXC_2 125 165 IPR033467 -
Bda11g01097 559 SMART CXC_2 211 252 IPR033467 -
Bda11g01097 559 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 5 ISOFORM X1 21 517 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02058 Bda11g01097 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00875 Bda-Chr3:7585006 Bda11g01097 Bda-Chr11:10752029 5.85E-28 dispersed
Bda11g00591 Bda-Chr11:6035569 Bda11g01097 Bda-Chr11:10752029 3.81E-23 dispersed
Bda11g01097 Bda-Chr11:10752029 Bda13g00106 Bda-Chr13:1467741 4.02E-28 dispersed
Bda01g02058 Bda-Chr1:56823876 Bda11g01097 Bda-Chr11:10752029 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16656 PF03638 TCR 2.90E-12 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01097 - - zju:107431760 662.529