Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01113 ACAATGTCGACCCCTTCTCCGACGACGTCTCCGGCTCCGACGTCTCCGTCGACAAACTCTACCTCTCCGCCGCCACCCGATGTTTCTCCCCCGCCTCCGCCTGCATCTGCTCCTCCTCCGACAACTCCATCGCCACCACCTCCCGCAACTGCAGCCCCTCCGGCTCCGACGACGACTTCTCCACCTCCACCGTCTACACCGTCAACTTCTCCTCCCCCGCCTTCCACAGCCTCTCCTCCTCCGTCTAATACCAACTCGACATCAAGAAGTCCCCCACCTCCGACAAGTTCTGGGTTTAGGAGTCCTCCACCGCCGCCGGCGACCACAACCCCGTCGTCGTCAACTCCCTCATCGTCGGGAATTTCAACGGGGGTAGTGATCGGAATCGCCGTCGGAGGGGCAATTGTTCTTGTGATATTAAGTATTTTATGTCTATGCTTCAGAAAGAAGACAAAGAGGAGGCGTGATGAAGAGTACTACGCCGGACCTCCACCGACTGGACCTAAAGATGACCCTTATGGCGGTCCTCCCCAACAATGGCAGCAGAATACTCCACCAACTAACCCGGCAGCAGGTGTCGTTCATAAGCCATCTCCTCCTCCGGCACATGCCTCCCGGCCCCCAAATTCTCCTCCGCCTCCCCAGTTCATGAGCAGCAGTGGAGGCTCTTATTCTGGCTCGGAAAATCCCCTCCCTCCTCCGCCTCCTCCGCCAGGCTATGCCTTTGGTTTCTCAAAAAGTAGCTTCACTTACGAAGAACTGGCAATGGCAACAGACGGTTTCTCGGACGCCAACCTCCTTGGACAAGGCGGGTTCGGCTATGTCCACCGAGGAGTGCTTCCGAACGGAAAGGAAGTCGCTGTAAAGCAGTTGAAAGCCGGAAGTGGGCAGGGAGAACGAGAATTCCAAGCCGAAGTTGAGATAATTAGTCGAGTTCATCATAAACATCTCGTCTCATTGGTCGGATATTGCATTACTGGGTCCCAACGATTGCTTGTCTACGAATTCGTTCCGAACAATACGTTGGAATTCCATTTACATGGTCATGGAAGGCCGACTATGGAATGGCCTACGAGACTGAAAATCGCGTTAGGATCTGCGAAAGGACTGGCTTACCTGCACGAGGATTGCCATCCGAAAATCATTCATCGAGACATCAAGGCATCAAATATTTTATTGGATTTCAAGTTTGAGGCTAAGGTCGCGGACTTCGGACTTGCGAAGTTTTCGTCTGATGTCAACACCCATGTCTCGACCCGAGTGATGGGAACTTTCGGATATCTGGCTCCAGAATACGCGTCAACTGGGAAATTGACTGAAAAATCAGATGTTTTCTCGTTTGGGGTTATGCTTTTGGAACTAATCACTGGTCGAAAACCGGTGGATATGTCGGACGCATTCATGGAGGATAGTTTAGTAGATTGGGCGAGACCTTTACTCAGCCGAGCACTGGAAGACGGAAACCTCGATGCTTTGGTTGATCCAAAGCTGCAAAATAATTACAATCACAATGAAATGTCTCGAATGGTTGCCTGTGCAGCTGCTTCGGTTCGGCATTCTGCTAGACGTCGACCGCGGATGAGCCAGGTGGTGCGAGCTCTGGAAGGAGACGCCTCTCTCTCTGATCTAAACGAAGGGATCCGGCCTGGACACAGCACGGTTTACAGCTCCCATGGAAGCTCAGATTACGACACCAACCAATACAACGAAGACCTGAAAAAGTTCAGGAAAATGGCGTTGGGTAGCCAGGAGTATGGAGCCAGCAGTGAATACAGCGGACCGACCAGCGACTACGGCTTGAACCCATCTGGCTCGAGCAGCGAAGCGCAAATCACCCGAGAAATGGAGATGAGAGAGGTGAAGAAAGACAGTCAAGGCTTCAATGAAAGCTCTTGA 1896 52.58 TMSTPSPTTSPAPTSPSTNSTSPPPPDVSPPPPPASAPPPTTPSPPPPATAAPPAPTTTSPPPPSTPSTSPPPPSTASPPPSNTNSTSRSPPPPTSSGFRSPPPPPATTTPSSSTPSSSGISTGVVIGIAVGGAIVLVILSILCLCFRKKTKRRRDEEYYAGPPPTGPKDDPYGGPPQQWQQNTPPTNPAAGVVHKPSPPPAHASRPPNSPPPPQFMSSSGGSYSGSENPLPPPPPPPGYAFGFSKSSFTYEELAMATDGFSDANLLGQGGFGYVHRGVLPNGKEVAVKQLKAGSGQGEREFQAEVEIISRVHHKHLVSLVGYCITGSQRLLVYEFVPNNTLEFHLHGHGRPTMEWPTRLKIALGSAKGLAYLHEDCHPKIIHRDIKASNILLDFKFEAKVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASTGKLTEKSDVFSFGVMLLELITGRKPVDMSDAFMEDSLVDWARPLLSRALEDGNLDALVDPKLQNNYNHNEMSRMVACAAASVRHSARRRPRMSQVVRALEGDASLSDLNEGIRPGHSTVYSSHGSSDYDTNQYNEDLKKFRKMALGSQEYGASSEYSGPTSDYGLNPSGSSSEAQITREMEMREVKKDSQGFNESS 631
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11007129 11010151 + Bda007591.1 Bda11g01113 16221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01113 631 ProSitePatterns Protein kinases ATP-binding region signature. 267 289 IPR017441 GO:0005524
Bda11g01113 631 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 19 617 - -
Bda11g01113 631 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 19 617 - -
Bda11g01113 631 MobiDBLite consensus disorder prediction 612 631 - -
Bda11g01113 631 SMART serkin_6 261 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01113 631 SUPERFAMILY Protein kinase-like (PK-like) 237 534 IPR011009 -
Bda11g01113 631 MobiDBLite consensus disorder prediction 541 566 - -
Bda11g01113 631 Gene3D Phosphorylase Kinase; domain 1 240 336 - -
Bda11g01113 631 Pfam Protein tyrosine and serine/threonine kinase 266 532 IPR001245 GO:0004672|GO:0006468
Bda11g01113 631 MobiDBLite consensus disorder prediction 192 215 - -
Bda11g01113 631 MobiDBLite consensus disorder prediction 95 111 - -
Bda11g01113 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 381 393 IPR008271 GO:0004672|GO:0006468
Bda11g01113 631 ProSiteProfiles Protein kinase domain profile. 261 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01113 631 MobiDBLite consensus disorder prediction 9 88 - -
Bda11g01113 631 Gene3D Transferase(Phosphotransferase) domain 1 337 545 - -
Bda11g01113 631 MobiDBLite consensus disorder prediction 585 631 - -
Bda11g01113 631 PRINTS Proline rich extensin signature 51 72 - -
Bda11g01113 631 PRINTS Proline rich extensin signature 1 13 - -
Bda11g01113 631 PRINTS Proline rich extensin signature 16 32 - -
Bda11g01113 631 PRINTS Proline rich extensin signature 36 48 - -
Bda11g01113 631 MobiDBLite consensus disorder prediction 585 611 - -
Bda11g01113 631 MobiDBLite consensus disorder prediction 153 240 - -
Bda11g01113 631 MobiDBLite consensus disorder prediction 1 122 - -
Bda11g01113 631 MobiDBLite consensus disorder prediction 550 566 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda02g00443 Bda-Chr2:45072971 Bda11g01113 Bda-Chr11:11007129 0 dispersed
Bda07g01069 Bda-Chr7:12532683 Bda11g01113 Bda-Chr11:11007129 6.71E-159 dispersed
Bda07g01602 Bda-Chr7:29691199 Bda11g01113 Bda-Chr11:11007129 1.01E-130 dispersed
Bda10g00129 Bda-Chr10:3557155 Bda11g01113 Bda-Chr11:11007129 0 dispersed
Bda11g01113 Bda-Chr11:11007129 Bda08g00923 Bda-Chr8:16984613 0 dispersed
Bda12g00400 Bda-Chr12:4710928 Bda11g01113 Bda-Chr11:11007129 2.07E-76 dispersed
Bda13g00252 Bda-Chr13:3193202 Bda11g01113 Bda-Chr11:11007129 2.48E-86 dispersed
Bda02g00390 Bda-Chr2:44427014 Bda11g01113 Bda-Chr11:11007129 2.74E-106 transposed
Bda07g01515 Bda-Chr7:28206869 Bda11g01113 Bda-Chr11:11007129 4.13E-159 transposed
Bda09g01087 Bda-Chr9:41402778 Bda11g01113 Bda-Chr11:11007129 6.52E-89 transposed
Bda12g00695 Bda-Chr12:33589751 Bda11g01113 Bda-Chr11:11007129 9.21E-98 transposed
Bda12g01075 Bda-Chr12:42471649 Bda11g01113 Bda-Chr11:11007129 1.31E-101 transposed
Bda01g02061 Bda-Chr1:56840481 Bda11g01113 Bda-Chr11:11007129 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69922 PF07714 PK_Tyr_Ser-Thr 7.70E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01113 - - bhj:120079307 773.081