Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01131 ATGAGAATCATATCAAACTCCCTTGGACAACCGGTTCAGTCCGGTTCGGGACCTTTCGGTCTGCCAGCTGAACTCGGGAAGATGACTGCTCAAGAAATAATGGACGCTAAGGCTCTTGCTGCTTCTAAAAGCCACAGTGAAGCTGAGAGAAGAAGACGAGAGAGAATCAACAACCATCTTGCTAAATTGCGCAGCTTACTACCCAACACCACTAAAACAGATAAAGCTTCATTACTAGCTGAAGTAATACAACACGTCAAAGAACTTAAACAGCAGACTTCTGTGATAGCAGAAACAAATCCAGTACCGACGGAAATGGACGAACTTACAGTCGATGCGTCTGACGAAGATGGTAAATTTATGATCAAAGCCTCTCTTTGTTGTGATGATCGCTCTGATCTTTTGCCTGATCTTATAAAAACGTTAAAATCATTGCGTTTAAAAACAATGAAAGCTGAAATTACAACGCTTGGGGGACGAGTGAAGAATGTGTTGTTCGTCACGGGAGAAGAAGATTCAGGTAACGCCGTCGAGCAAACACAACAGCAGTACTGTATAAGTTCGATTCAGGAAGCTCTCAAGGCAGTGATGGAGAAGACGAGTGGAGATCATCACGAGTCTTCTTCTGGAAATGTTAAGAGACAAAGAACAAACAATATTAGTATCCTTTAA 672 42.26 MRIISNSLGQPVQSGSGPFGLPAELGKMTAQEIMDAKALAASKSHSEAERRRRERINNHLAKLRSLLPNTTKTDKASLLAEVIQHVKELKQQTSVIAETNPVPTEMDELTVDASDEDGKFMIKASLCCDDRSDLLPDLIKTLKSLRLKTMKAEITTLGGRVKNVLFVTGEEDSGNAVEQTQQQYCISSIQEALKAVMEKTSGDHHESSSGNVKRQRTNNISIL 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11301471 11302951 + Bda007609.1 Bda11g01131 16239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01131 223 Gene3D - 34 99 IPR036638 GO:0046983
Bda11g01131 223 Pfam Helix-loop-helix DNA-binding domain 43 89 IPR011598 GO:0046983
Bda11g01131 223 SMART finulus 46 95 IPR011598 GO:0046983
Bda11g01131 223 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 40 89 IPR011598 GO:0046983
Bda11g01131 223 CDD bHLH_AtAIG1_like 35 113 - -
Bda11g01131 223 PANTHER TRANSCRIPTION FACTOR BHLH30 2 223 - -
Bda11g01131 223 PANTHER TRANSCRIPTION FACTOR BHLH30 2 223 IPR045847 GO:0003700|GO:0006355
Bda11g01131 223 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 44 99 IPR036638 GO:0046983
Bda11g01131 223 MobiDBLite consensus disorder prediction 199 223 - -
Bda11g01131 223 MobiDBLite consensus disorder prediction 1 23 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02101 Bda11g01131 CCT
Bda01g02101 Bda11g01131 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00405 Bda-Chr1:30485686 Bda11g01131 Bda-Chr11:11301471 2.75E-48 dispersed
Bda01g00856 Bda-Chr1:41186593 Bda11g01131 Bda-Chr11:11301471 1.87E-32 dispersed
Bda10g01120 Bda-Chr10:45186331 Bda11g01131 Bda-Chr11:11301471 1.33E-110 dispersed
Bda11g01131 Bda-Chr11:11301471 Bda14g00178 Bda-Chr14:1228380 3.48E-20 dispersed
Bda01g00912 Bda-Chr1:42151035 Bda11g01131 Bda-Chr11:11301471 5.50E-36 transposed
Bda01g02101 Bda-Chr1:57108307 Bda11g01131 Bda-Chr11:11301471 1.13E-136 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16662 PF00010 HLH 1.20E-12 No_clan Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01131 - - jre:108993280 341.658