Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01162 | ATGGATTTAGGTGGGAATGATAATTTTGAACTAGAAAACAGGACTGAGAATCCTATGAACTGTTCACCAAGTCTGTCCTCTGGCTGGCCATTCGGTGGAGACCACCTTGCAAACACGGCAATGGGATTGGCCAACTCAATGGTGGATTCTTTTGGTCCGAACTTCAATGATAGTGCAGCTTCTTTGAGAAGTGTTGATAGAACACTTGATATGAGTTGGAACCCACCAAATCAAATGATGAAAGGAATTAATTTATCGAATTTGATTCACTCGAGCTTACCTCAATTTCCAGCCGATTCTGCATTCATCGAGCGAGCAGCTAGATTATCTTGCTTCAATGGTGGAAATCTCATGGAAACAGCTGGTCCTTTCAGCGTTCCTCAACCTATGACTCTTTATTCTAGGAGTTTGGTGATTCCAGGTAATCAAGAATTTACAGCCATTAATGGGATGAGATCAGATACCATGGGACAGCCTCAAAAACATGAGAATAGTCATATAGGTGAAGTCTCTATGGAAGCTTGCTTGGAGGATGGAACTAGCAGTCCTAAGAATGAAGGACAAAATGAGAACCATATGAGATCTCATGATGAAGAAAAACAATGTACTGGCGGGTCGGAAGATGAAATGAGTGGTAGTGGTCAAGATGAACCATCTATGGTGGAGGGTAGATGTAAAGAGTCCTCTGGCAACAAAAAAAGGAAAAGGAGTAGGCAGAGTAATGGACTTGGCCAAGCCAAAGAAGCTGCACAACAAACCAGTGAATCTGCAAGGGATGATAATGAGATTCAACATAAGAACGATCAAAACCCATGTTCGGTTAACAACAAATCTACTGGAAAACAAGGTTCTCAAGCCTCCGAACCCCTCAAGGAAGAATACATTCACGTTAGAGCACGAAGAGGTCAGGCAACAAATAGCCATAGTCTTGCAGAAAGGGTTAGAAGGGAAAAGATCAGTGAACGAATGAAGTTTCTTCAAGACCTCGTACCTGGTTGCAGCAAGGTCACTGGCAAGGCGGTAATGCTAGATGAAATCATAAATTACGTACAGTCGCTGCAACGACAAGTAGAGTTTTTGTCAATGAAACTTGCCACTGTCAATCCACGGATAAATTTCAGTATTGATGGTCTTGCGAAAGATATACTTAAAACAAGGGCTGGTCCATCATCTTCTTTGGGCTACTCACCAGACATTTCTATGGCTTATCCTCCATTACAACTTTCTCAACAAGGGCTTCTTTCCTGGGGTGTTAATGGGATGGGCGGCTCTTCTGAAATTCTCCGAAGAACACTCGCTTCCCAGTTGACACCACTGACTGGTGGATTTAAAGAGCCTTCTCAGCCATCAAATGTGTGGGAGGATGATCTCCACAATGTTTTCCAGACGAGCTTTGGAACTTCAGCTCCTTCCAATACCCAAAATGTTGATGGTAAGATCTATCTATTATTTCCAGTTGATCATTCTCTTTACTCTATTCTTTATATCCTTTTATAA | 1497 | 42.15 | MDLGGNDNFELENRTENPMNCSPSLSSGWPFGGDHLANTAMGLANSMVDSFGPNFNDSAASLRSVDRTLDMSWNPPNQMMKGINLSNLIHSSLPQFPADSAFIERAARLSCFNGGNLMETAGPFSVPQPMTLYSRSLVIPGNQEFTAINGMRSDTMGQPQKHENSHIGEVSMEACLEDGTSSPKNEGQNENHMRSHDEEKQCTGGSEDEMSGSGQDEPSMVEGRCKESSGNKKRKRSRQSNGLGQAKEAAQQTSESARDDNEIQHKNDQNPCSVNNKSTGKQGSQASEPLKEEYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRINFSIDGLAKDILKTRAGPSSSLGYSPDISMAYPPLQLSQQGLLSWGVNGMGGSSEILRRTLASQLTPLTGGFKEPSQPSNVWEDDLHNVFQTSFGTSAPSNTQNVDGKIYLLFPVDHSLYSILYILL | 498 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11889411 | 11893781 | + | Bda007653.1 | Bda11g01162 | 16270 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01162 | 498 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 301 | 372 | IPR036638 | GO:0046983 | |
Bda11g01162 | 498 | MobiDBLite | consensus disorder prediction | 189 | 205 | - | - | |
Bda11g01162 | 498 | Gene3D | - | 300 | 373 | IPR036638 | GO:0046983 | |
Bda11g01162 | 498 | PANTHER | TRANSCRIPTION FACTOR BHLH49 | 59 | 479 | - | - | |
Bda11g01162 | 498 | CDD | bHLH_AtBPE_like | 293 | 378 | - | - | |
Bda11g01162 | 498 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Bda11g01162 | 498 | MobiDBLite | consensus disorder prediction | 177 | 290 | - | - | |
Bda11g01162 | 498 | Pfam | Helix-loop-helix DNA-binding domain | 306 | 354 | IPR011598 | GO:0046983 | |
Bda11g01162 | 498 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 59 | 479 | IPR024097 | GO:0006355 | |
Bda11g01162 | 498 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 303 | 353 | IPR011598 | GO:0046983 | |
Bda11g01162 | 498 | MobiDBLite | consensus disorder prediction | 267 | 286 | - | - | |
Bda11g01162 | 498 | SMART | finulus | 309 | 359 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda01g02113 | Bda11g01162 | CCT | |
Bda01g02113 | Bda11g01162 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g01585 | Bda-Chr1:51700642 | Bda11g01162 | Bda-Chr11:11889411 | 2.72E-47 | dispersed | |
Bda08g00933 | Bda-Chr8:17209090 | Bda11g01162 | Bda-Chr11:11889411 | 7.91E-54 | dispersed | |
Bda11g01162 | Bda-Chr11:11889411 | Bda13g00303 | Bda-Chr13:3849368 | 9.75E-47 | dispersed | |
Bda01g02113 | Bda-Chr1:57180782 | Bda11g01162 | Bda-Chr11:11889411 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16667 | PF00010 | HLH | 6.20E-06 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01162 | - | - | zju:107429134 | 523.087 |