Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01167 | GTTATGAACTCAGAGGAGAAGGCTACAATGGAGATCGTTCAACCTTCTGAACATCTCTGCTATGTCCGATGCAACTTCTGCAACACTATTCTTGCGGTTGGGATTCCATGCAAACGTTTGCTGGATACAGTGACAGTGAAGTGCGGCCATTGCAGCAACCTTTCTTTTCTGAGCACTAGACCTCCATTACAAGGCCAATGCTTTGATCATCCATTGTCTCTTCAGACGCAGGTAATTTGCAAAGGCCAGCCTTCATCATCGCCCTCTTCCTCCTCCAGTGAGCCATTATCACCCAAAGCTCCATTTGTGGTCAAACCTCCTGAGAAGAAGCACAGAATTCCATCTGCATACAATCGTTTCATGAAAGAGGAAATACAGCGTCTAAAGGCAGCCAACCCTGAAATACCTCATCGAGAAGCATTCAGCAAAGCAGCAAAAAGTTGGGCGAGGTACATTCCAAACGCACCAGGAGGATCAAGCTCTGCTGGAATGAGCAACAATGTAAGTTAA | 510 | 46.27 | VMNSEEKATMEIVQPSEHLCYVRCNFCNTILAVGIPCKRLLDTVTVKCGHCSNLSFLSTRPPLQGQCFDHPLSLQTQVICKGQPSSSPSSSSSEPLSPKAPFVVKPPEKKHRIPSAYNRFMKEEIQRLKAANPEIPHREAFSKAAKSWARYIPNAPGGSSSAGMSNNVS | 169 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11996252 | 11997724 | + | Bda007660.1 | Bda11g01167 | 16275 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01167 | 169 | Pfam | YABBY protein | 15 | 151 | IPR006780 | GO:0007275 | |
Bda11g01167 | 169 | PANTHER | PROTEIN CRABS CLAW | 8 | 162 | - | - | |
Bda11g01167 | 169 | PANTHER | PROTEIN YABBY 6-RELATED | 8 | 162 | IPR006780 | GO:0007275 | |
Bda11g01167 | 169 | MobiDBLite | consensus disorder prediction | 80 | 97 | - | - | |
Bda11g01167 | 169 | MobiDBLite | consensus disorder prediction | 80 | 109 | - | - | |
Bda11g01167 | 169 | Gene3D | High mobility group box domain | 92 | 154 | IPR036910 | - | |
Bda11g01167 | 169 | SUPERFAMILY | HMG-box | 95 | 149 | IPR036910 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g00056 | Bda-Chr11:675973 | Bda11g01167 | Bda-Chr11:11996252 | 9.48E-33 | dispersed | |
Bda11g01167 | Bda-Chr11:11996252 | Bda01g01948 | Bda-Chr1:55878994 | 2.08E-39 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16668 | PF04690 | YABBY | 4.80E-47 | CL0114 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01167 | K25796 | - | vvi:100261225 | 278.1 |