Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01176 ATGGAATCAAACCAAGGTGTGGTTCTACCTTCACAGTTTCCGGAACATAATTGTATGAATAACATGGGAATGTCGAATGTAGGAGGATATGAAAATCAACGGCCTGATCTACCAGCTCTTAAGAAGCGAGGTCATGGATGCCGTTCTTGGATAAAAATTGATCAGGATGGAAACTCAAAAATATTGGAACTTGATAAGGCCACAATAATGAGACATTGCTCCCTACCTTCTAGAGATCTTCGACTTTTGGATCCTATGTTCATTTATCCTTCTACGATACTGGGACGAGAGAAGGCGATTGTGGTCAGTCTTGAACAGATCAGATGTATAATCACTTCAAATGAAGTTGTTTTAATGAACTCCTTAGATGGGTGTGTTGTACAGTACAGGTCGGAGTTGTCCAATCGCCTCCAGACTTCTAAATACGAATCAGGTGAACAACCATATGGTTTACCCTTTGAGTTTAAAGCCCTGGAGCTGGCTTTGGAGCTCACTTGCATGTCTCTAGATGCTCAGGTGAAGGAACTGGAAATGGAGATATATCCTGGCCTGGATGAACTTGCATTATCCATTAACACCCTTAACCTAGAACGGGTCCGAAGATTTAAAGGCCATCTCCTTGGATTGACCCAGCGTGTTCAAAAGGTTCGTGATGAAATTGAACATCTCATGAATGATGATGGTGATATGGCTGAGATGTATTTGACTGAGAAAAAAGAAAGGTTAGAGGGCTATACCCTAAATGACCTTCCTGTTCAAACAAAGCGCAGATCAAAGTTGCTATCCAAATCTGCTCCAGTCTCGCCAGTTGGATCAATTAATCGAACCCAGAAACTGGAAAGGACATTTAGTGGTGTTGTTAGTTCAAGCAGACATGGAAGCTCGATAAGTTTATCCAGCAATGGAGAAAACATTGATCAACTGGAAATGCTACTTGAAGCCTACTTTGTTGGCATAGACAACACCCTCAACAAGTTATTATCGCTCAAGGAATGTATTGATGATACTGAAGATTTAATCAACATTAAACTGGATAATGTTCAGAACCACCTGATAAAATTTCAGCTACTTCTCACAGCAGCTACTTTCATGGCTACAATCTTTGCTACGGTTACCGCAATTTTCGGTATGAATTTCTCTGCTCAAATCTTCGATTCTCCAACTGCATTCAACTGGGTTTTAGCTGTAACTAGTGGCTTTTGTGGATTATTTTTCTTATCTTTCCAGATTTATTTTAGACATAAGAAATCTTTCCCATTGTAA 1263 40.06 MESNQGVVLPSQFPEHNCMNNMGMSNVGGYENQRPDLPALKKRGHGCRSWIKIDQDGNSKILELDKATIMRHCSLPSRDLRLLDPMFIYPSTILGREKAIVVSLEQIRCIITSNEVVLMNSLDGCVVQYRSELSNRLQTSKYESGEQPYGLPFEFKALELALELTCMSLDAQVKELEMEIYPGLDELALSINTLNLERVRRFKGHLLGLTQRVQKVRDEIEHLMNDDGDMAEMYLTEKKERLEGYTLNDLPVQTKRRSKLLSKSAPVSPVGSINRTQKLERTFSGVVSSSRHGSSISLSSNGENIDQLEMLLEAYFVGIDNTLNKLLSLKECIDDTEDLINIKLDNVQNHLIKFQLLLTAATFMATIFATVTAIFGMNFSAQIFDSPTAFNWVLAVTSGFCGLFFLSFQIYFRHKKSFPL 420
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12156585 12159249 + Bda007675.1 Bda11g01176 16284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01176 420 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 3 420 IPR039204 -
Bda11g01176 420 Coils Coil 206 226 - -
Bda11g01176 420 PANTHER MAGNESIUM TRANSPORTER MRS2-5 3 420 - -
Bda11g01176 420 CDD Mrs2_Mfm1p-like 50 416 IPR039204 -
Bda11g01176 420 Gene3D Magnesium transport protein CorA, transmembrane region 125 351 - -
Bda11g01176 420 Gene3D - 38 121 - -
Bda11g01176 420 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 356 408 IPR045863 -
Bda11g01176 420 Gene3D Magnesium transport protein CorA, transmembrane region 358 416 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g00496 Bda-Chr5:51751997 Bda11g01176 Bda-Chr11:12156585 3.20E-140 dispersed
Bda08g00266 Bda-Chr8:2739618 Bda11g01176 Bda-Chr11:12156585 4.34E-75 dispersed
Bda09g00228 Bda-Chr9:3077204 Bda11g01176 Bda-Chr11:12156585 2.27E-10 dispersed
Bda11g01176 Bda-Chr11:12156585 Bda12g00562 Bda-Chr12:9654647 4.10E-158 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01176 K16075 - rcu:8264709 538.88