Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01177 ATGGGATCGAAAAATGTGCTCACAGATTTGGTGTTGGAAGAATGGAATGGTTCTTCTTCTACGAAGCTTTCTAGAACTGCCACCATAACTACCGCTCCTCACCTCACCATCGAAAGGCGAGTTATTACGATTTCATCCGGTCGCCGGTTTAATCACGTTTGGGGACGATTCTTGGATGCATTCGGCTTTCCTAGCAGTGTAACTCCGGATTATGTCCCTTTTCAAGTATGGGATTTGTTGCAGGGTCTCTCAACATACATAAGGACTATGCTTTCTACACAAGCTCTGTTAAGTGCCATTGGAGTTGGTGAGAAATCGGCTACTGTGATTGGTGCCACATTTCAGTGGTTTCTGAGGGATCTGACTGGAATGGTTGGAGGTATCTTATTCACATTCTATCAGGGATCAAATCTAGATAGTAATGCAAAAATGTGGCGTTTGGTTGCAGATCTTATGAATGATCTTGGGATGTTAATGGACCTACTCTCCCCATTATTTCCATCAGCATTCATACTCATTGTTTGCTTAGGCAGCCTGTCAAGATCATTCACTGGTGTTGCTAGTGGAGCTACCAGAGCTGCTTTAACACAGCATTTTGCCCTTCAGCATAACGCAGCAGATATATCTGCCAAGGAAGGAAGTCAAGAGACAGTAGCCACAATGATAGGAATGGCATTGGGTATGCTTCTTGCGCATGTTACAGTGGGACATCCGCTGGCTATTTGGTTCGCTTTTTTGTGTCTCACCATGTTTCATATGTATGCGAACTACAAGGCTGTGGGGTGCGTTGCTTTGACTTCGTTAAACCCAGAGAGAAGTTCAATTGCTTTACAGCATTTCATGGCGTCTGGTAAAGTTCTCTCTCCTGAAAAAGTCTCAAGGATGGAGCATGTATTACCAGGTTTTTCAGCAAAGCATTTGCTGGTGGAGAGGAAGGAAGTTGTCGGCATTATTATGCATAAAGATTCAACCTCTGCGGATGTCTTGCACGCTTTTATTCATGCACTTGTTATGGCAAATCTTCCTGATACAAGAAACTCCAAGCATTTGGAGAGCAGAACATGGATGGATAAAAACTATGAAGTTTTTATTGAAAAGAGGTTGACGCGTGCTGTGGACGATATGTTAGGTTTGACTGAACACCGCTACTGTCTCCGGCATATGTATGCAAACTTTAAAAGTCAATTTCGGGGCAGAGCGTACAGGGATGCAATGTTTCAAGCGGCCAGGGCACCCACAAGTTTTCATTTTGAAAAAGAAATGAGAAATCTTGACCAGATCAATTCAAAAGCTCACGCATGGCTTAGACGAACACCACCAAGCTACTGGGTCAGTCATGCATTTTCTCCAATCCCCAAATGTGACATGGGATTGAATAATCTATGCGAGTCATTCAATGCAGTTCTACTGCCGACCAGAGACAAACCTGATATTTCCCTGCATTCGCTAAGACAGGCCCCGGAAGATTTCGTCCATCCATACTATCTTCGGCAGACATACTTGGCGATGTACTCAAACTTCATTCATCCAATTAGTGGGCAAACCATGTGGCCGCCCGTCAAAAATGCAAAGAAGATCCTTCCGCCCAAGAGACGTCAACAACCTGGCAGGCCGAAGAAACATAAAGTGCGCGATGTGGATGAGTCGTCGAGGACGTCTGTTAGTAGGAGGAAATCGACTGTGGCGTTCAGCATATGTCGGCGTCAGGGGCATAATAGTCGCACCTGTCCTGATAGGGGATCTAATTCCGGCGCGGCTGGTGGTATTGCTTCGCAGGACACATTTATGGGTTTTCACACATAA 1803 44.98 MGSKNVLTDLVLEEWNGSSSTKLSRTATITTAPHLTIERRVITISSGRRFNHVWGRFLDAFGFPSSVTPDYVPFQVWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMVGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFILIVCLGSLSRSFTGVASGATRAALTQHFALQHNAADISAKEGSQETVATMIGMALGMLLAHVTVGHPLAIWFAFLCLTMFHMYANYKAVGCVALTSLNPERSSIALQHFMASGKVLSPEKVSRMEHVLPGFSAKHLLVERKEVVGIIMHKDSTSADVLHAFIHALVMANLPDTRNSKHLESRTWMDKNYEVFIEKRLTRAVDDMLGLTEHRYCLRHMYANFKSQFRGRAYRDAMFQAARAPTSFHFEKEMRNLDQINSKAHAWLRRTPPSYWVSHAFSPIPKCDMGLNNLCESFNAVLLPTRDKPDISLHSLRQAPEDFVHPYYLRQTYLAMYSNFIHPISGQTMWPPVKNAKKILPPKRRQQPGRPKKHKVRDVDESSRTSVSRRKSTVAFSICRRQGHNSRTCPDRGSNSGAAGGIASQDTFMGFHT 600
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12166417 12178700 + Bda007676.2 Bda11g01177 16285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01177 600 Pfam Vitamin B6 photo-protection and homoeostasis 56 283 IPR006968 -
Bda11g01177 600 PANTHER RUS1 FAMILY PROTEIN C16ORF58 304 367 IPR006968 -
Bda11g01177 600 MobiDBLite consensus disorder prediction 555 589 - -
Bda11g01177 600 PANTHER PROTEIN ROOT UVB SENSITIVE 3 7 302 - -
Bda11g01177 600 MobiDBLite consensus disorder prediction 540 554 - -
Bda11g01177 600 MobiDBLite consensus disorder prediction 526 593 - -
Bda11g01177 600 PANTHER RUS1 FAMILY PROTEIN C16ORF58 7 302 IPR006968 -
Bda11g01177 600 PANTHER PROTEIN ROOT UVB SENSITIVE 3 304 367 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g00666 Bda-Chr1:33662911 Bda11g01177 Bda-Chr11:12166417 1.33E-66 dispersed
Bda03g01556 Bda-Chr3:54726373 Bda11g01177 Bda-Chr11:12166417 3.30E-09 dispersed
Bda03g01636 Bda-Chr3:55712017 Bda11g01177 Bda-Chr11:12166417 1.27E-39 dispersed
Bda06g00185 Bda-Chr6:2517519 Bda11g01177 Bda-Chr11:12166417 1.31E-30 dispersed
Bda10g00527 Bda-Chr10:38925839 Bda11g01177 Bda-Chr11:12166417 1.85E-30 dispersed
Bda11g01177 Bda-Chr11:12166417 Bda14g01221 Bda-Chr14:12307381 1.09E-19 dispersed
Bda14g01493 Bda-Chr14:22752284 Bda11g01177 Bda-Chr11:12166417 7.48E-11 dispersed
Bda11g01177 Bda-Chr11:12166417 Bda02g00839 Bda-Chr2:48939330 2.21E-67 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01177 - - qsu:112036624 548.895