Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01180 ATGGTTGCTCTCTTCGTCGGCTTGAACTCTGCTCCGCCGGAGGCGAAATGGTGGTCTATGAAGCATCTGAGGGGGAGAGTTACGGCCGATGTGTTTCCCTCCTTCCTTCCCAAAGAAGTCGACAAAATCAAAGATCCTTTTGCTCGGAAGCTGGCGTCTAGGATTGAGAGGGTTCCAGTGAGCTTTTCTCAAAATTGTGTTATGACTAGTTGTGTGAGGCCATCGATAAAGAGTGAAATGAGTCCAGTGGTTCTACTCCATGGTTTTGACAGCTCCTGTTTAGAGTGGAGATATACACATCCATTGCTTGAGGAGGCTGGTTTGGAGACTTGGGCTGTTGACATTCTTGGATGGGGATTTTCTGATTTAGAAAGCCTTCCACCTGTCGATGTGACATCAAAGCGGGAACACTTTTATCAGCTTTGGAGTACCTACATTAAAAGGCCTATGTTATTGGTTGGACCAAGCCTCGGTGCTGCTGGTGCTATTGATTTTGCTGTCAAATATCCAGAGGCTGTTGAAAAGCTTGTTTTGATAGATGCTAGTGTATATGCAGAAGGCACTGGAAACTTATCAACCTTACCGAGAGGGCTAGCATATGCCGGGGTGTCTTTGTTAAAGAGCATACCTCTGCGTCTCTATGTGAACGTGCTGGCATTCAATTCCATATCACTGAATACAAGCATTGATTGGATGAGAGTGGGTCGTTTACATTGCCTTCTACCTTGGTGGGAGGATACAACAGTGAATTTTATGATGAGCGGAGGTTATACTGTCAGCAGCTTGATAAAACAGGTAAAACAGAAGACACTCATCATATGGGGTGAGAATGATCAGATTATCAGCAACAAATTTGCAGTGAGATTGAACAGTGAGTTACCAAATTCAATTCTTCGACAAGTACCCGACTGCGGCCACATTCCTCACGTGGAGAAGCCGAGCATCGTCTCCCATTTTATCACGGAGTTTGTTAGAGAAGAATTCACTAGTAATTCAGAGATTGAACAGTGA 1011 44.71 MVALFVGLNSAPPEAKWWSMKHLRGRVTADVFPSFLPKEVDKIKDPFARKLASRIERVPVSFSQNCVMTSCVRPSIKSEMSPVVLLHGFDSSCLEWRYTHPLLEEAGLETWAVDILGWGFSDLESLPPVDVTSKREHFYQLWSTYIKRPMLLVGPSLGAAGAIDFAVKYPEAVEKLVLIDASVYAEGTGNLSTLPRGLAYAGVSLLKSIPLRLYVNVLAFNSISLNTSIDWMRVGRLHCLLPWWEDTTVNFMMSGGYTVSSLIKQVKQKTLIIWGENDQIISNKFAVRLNSELPNSILRQVPDCGHIPHVEKPSIVSHFITEFVREEFTSNSEIEQ 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12185772 12189552 + Bda007678.1 Bda11g01180 16288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01180 336 Gene3D alpha/beta hydrolase 73 330 IPR029058 -
Bda11g01180 336 PRINTS Alpha/beta hydrolase fold signature 166 179 IPR000073 -
Bda11g01180 336 PRINTS Alpha/beta hydrolase fold signature 152 165 IPR000073 -
Bda11g01180 336 PRINTS Alpha/beta hydrolase fold signature 107 122 IPR000073 -
Bda11g01180 336 PRINTS Alpha/beta hydrolase fold signature 270 284 IPR000073 -
Bda11g01180 336 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 26 330 - -
Bda11g01180 336 SUPERFAMILY alpha/beta-Hydrolases 82 325 IPR029058 -
Bda11g01180 336 Pfam Alpha/beta hydrolase family 83 313 IPR000073 -
Bda11g01180 336 PANTHER HYDROLASE 26 330 - -
Bda11g01180 336 PRINTS Epoxide hydrolase signature 166 179 IPR000639 GO:0003824
Bda11g01180 336 PRINTS Epoxide hydrolase signature 87 105 IPR000639 GO:0003824
Bda11g01180 336 PRINTS Epoxide hydrolase signature 107 122 IPR000639 GO:0003824
Bda11g01180 336 PRINTS Epoxide hydrolase signature 301 323 IPR000639 GO:0003824
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01180 Bda-Chr11:12185772 Bda12g00185 Bda-Chr12:1732885 5.80E-143 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01180 - - mnt:21409074 492.271