Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01183 | ATGTCGGCTAACATATTTTGTAGGAGCAAAGTCCGAAAGAGAGGTCAAAAGAGGACGCGACAGCAAAGATTTGCGTTTCTAACCAAGAGTGACATCGATCATCTTGAAGATGGGTATAGATGGAGAAAATATGGACAGAAAGCTGTTAAAAATAGTCCATTCCCAAGCAGGAGTTACTACCGCTGCACAAACGGCAAATGTACTGTGAAGAAAAGGGTTGAGCGTTCATCGGAAGATCCCACCATTGTTGTAACCACATACGAAGGTCAACATTGCCATTACACTGTAGGATTGTCTCGAAGCGGAGTCATTGGCCATGCAGCTTCCTTTGATGGTCAGTTTCCGCCTCTCGTCCCCCATTTCTATTGCCCTGAACTTAACCTTCCAGCGGAGAATCCACTTATTGTGCCACAGTTACAGCCGGACAATCATCCAGGCGGAATATCTAATGTGATTTCAGAGACGACTTCGCAGCTTGTTCCTCCTGATCAAGGATTGCTAGGCGACATTGTGCCAAGAGGAATACGTAAAAGATGA | 537 | 45.44 | MSANIFCRSKVRKRGQKRTRQQRFAFLTKSDIDHLEDGYRWRKYGQKAVKNSPFPSRSYYRCTNGKCTVKKRVERSSEDPTIVVTTYEGQHCHYTVGLSRSGVIGHAASFDGQFPPLVPHFYCPELNLPAENPLIVPQLQPDNHPGGISNVISETTSQLVPPDQGLLGDIVPRGIRKR | 178 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12207069 | 12208262 | - | Bda007681.1 | Bda11g01183 | 16291 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01183 | 178 | SUPERFAMILY | WRKY DNA-binding domain | 28 | 94 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01183 | 178 | Gene3D | WRKY domain | 22 | 89 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01183 | 178 | Pfam | WRKY DNA -binding domain | 36 | 93 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01183 | 178 | ProSiteProfiles | WRKY domain profile. | 30 | 96 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01183 | 178 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 10 | 102 | IPR044810 | GO:0003700 | |
Bda11g01183 | 178 | SMART | WRKY_cls | 35 | 95 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01183 | 178 | PANTHER | WRKY TRANSCRIPTION FACTOR 48-RELATED | 10 | 102 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01183 | Bda-Chr11:12207069 | Bda13g00224 | Bda-Chr13:2849666 | 2.47E-44 | dispersed | |
Bda01g02132 | Bda-Chr1:57313980 | Bda11g01183 | Bda-Chr11:12207069 | 4.90E-105 | wgd | |
Bda11g01183 | Bda-Chr11:12207069 | Bda11g01309 | Bda-Chr11:14181980 | 2.56E-133 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16671 | PF03106 | WRKY | 3.30E-23 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01183 | - | - | zju:107428893 | 224.172 |