Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01189 GAAATGGTTCGAGGCCTTTCAGTATGTAATCTTCAGGCCTCAAGAAATGATAGTGTTTATGGGTCAACCCCTTCATGGAGGAGTCATGTCAAGCTGATGAGGAATACTTTGATAACTTCTATGCTTTCCAGAAATTATATCTGGGGTAAATATGCACAGGGATGTTTCTTATCCAGCACACCCACAATGTTTAGACAGAGAAATTGTAGAGTTCAAGCTGGGTGGCTGTTCAAAGGGAGTGGACAAGGGTTGGATGCAAATTCTGAGCGTAGTGAGAGTGCTAATCAAGATATTTTGATCTTCTTTTTCCAGCTTGATCTGGAAACCCGAGTACAGTATGCCTTGAATCTGGAGCAATATGAAATTGCTCAACAACTGAGAAGCAAGATTACGGAGGTTGAAGCAGAAATAAGCAGACGGGTAGAATCAAAAAGAGGACTGTCTTCAAAGAGTGATGTGCAGGACAAAGCTTTAAGTATCATTCGGCTACGTGCAGATCTGCAGAATGCTATTGACAGTGAAAATTATTCCTTGGCAGCTCAACTACGGGATGAAATTTCCAATTTGGAGGCAGAATCTCTTGCTGCGTCAGCAAAAGCTCTGGTATATGAAAATGCAAATTATTCATTTCGCCTTGGACAGAAAGTGAAGCACAAAATCTTCGGATATAAAGCTGTAGTTTGTGGAATGGATCCAGTGTGCTGTGAATCAAGCTCATGGAAGGAGGTTGCGCGTGTTGAAAAGTTGTCACGTGGTTCTAATCAGCCATTTTATCAGGTTTTAGTGGATGTTCGTGCCGACCCTGATCTATTGGTGGCATATGTTCCTGAAGAGAATCTCCTATCTCCTGAGAAACCTGACCAGGGCAGATTTGACCATCCTTACACTTCATTCTTATTTTATGGAGCGGATGCAGCTGGTGACTTCATTCCGATCAAGCAACTGCGCGAGAAGTACAACCGGCCCCGACATGAAATACCAATGGATCTCGATGACGGAGAACAAGGTGGTGAAACTTGA 1020 43.04 EMVRGLSVCNLQASRNDSVYGSTPSWRSHVKLMRNTLITSMLSRNYIWGKYAQGCFLSSTPTMFRQRNCRVQAGWLFKGSGQGLDANSERSESANQDILIFFFQLDLETRVQYALNLEQYEIAQQLRSKITEVEAEISRRVESKRGLSSKSDVQDKALSIIRLRADLQNAIDSENYSLAAQLRDEISNLEAESLAASAKALVYENANYSFRLGQKVKHKIFGYKAVVCGMDPVCCESSSWKEVARVEKLSRGSNQPFYQVLVDVRADPDLLVAYVPEENLLSPEKPDQGRFDHPYTSFLFYGADAAGDFIPIKQLREKYNRPRHEIPMDLDDGEQGGET 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12246696 12249236 + Bda007688.1 Bda11g01189 16297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01189 339 PANTHER SI:DKEY-261L7.2 88 333 - -
Bda11g01189 339 SMART YccV_like_2_a 207 311 IPR011722 GO:0003677
Bda11g01189 339 Pfam Hemimethylated DNA-binding protein YccV like 209 305 IPR011722 GO:0003677
Bda11g01189 339 PANTHER SI:DKEY-261L7.2 88 333 - -
Bda11g01189 339 SUPERFAMILY YccV-like 208 304 IPR036623 GO:0003677
Bda11g01189 339 Pfam UvrB/uvrC motif 160 191 IPR001943 GO:0005515
Bda11g01189 339 Gene3D - 206 306 IPR036623 GO:0003677
Bda11g01189 339 TIGRFAM yccV: hemimethylated DNA binding domain 208 309 IPR011722 GO:0003677
Bda11g01189 339 Coils Coil 179 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01189 Bda-Chr11:12246696 Bda11g01315 Bda-Chr11:14216930 5.91E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01189 - - jre:109002884 494.197