Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01201 CGATCTGATTCTGCTTCATTTTTGTTTCTGATGAACTCCGAGACGTCTGGCGGCGGAGCCAAGGGAGGCCCGTCCGTGCCTGCTGACAAGGAGAAGCAGAAGGAGAAAGCTCGAGTGAGCAGAACGTCGCTGATATTGTGGCACGCTCATCAGAATGACACCGCTGCGGTTCGCAAGCTGTTGGAGGAGGATCGATCCCTGGTCCAAGCTAGAGACTACGATAGTCGCACTCCTCTTCATGTCGCTTCACTCCATGGTTGGATCGATGTCGCCAAGTGCTTGATTGAGTATGGTGCTGATGTCAACGCCCAGGATCGCTGGAAGAACACTCCTCTAGCTGATGCGGAAGGAGCTAAAAAGCAAGTGATGGTTGAGCTTTTGAAGTCATTTGGGGGTCTGTCTTATGGCCAAAATGGAAGCCATTTTGAACCAAAACCTGTACCTCCTCCTCTACCAAACAAGTGTGATTGGGAAATTGACCCTTCTGAACTGGACTTCTCAAATGCATATATTATTGGCAAGGGTTCTTTTGGAGAGATATTAAAAGCTTATTGGCGTGGAACTCCAGTAGCTGTCAAACGCATTCTTCCTTCTCTGTCAGATGATAGATTGGTGATTCAAGACTTTAGGCATGAAGTTAATTTGCTGGTGAAGCTTCGACATCCAAATGTAGTCCAATTTCTAGGTGCTGTCACAGAGAAGAAGCCTCTTATGTTGATTACTGAATATTTAAGAGGGGGGGATCTTCATCAGTACCTGAAAGACAAAGGTTCACTAAGTAGCTCAGCAGCCATCAATTTTGCATTGGATATTGCTAGAGGCATGGCTTATCTTCATAATGAACCTAATGTCATTGTTCATCGAGACTTAAAACCAAGGAATGTGCTTTTAGTCAATTCTGGTGCTGACCATTTAAAAGTTGGAGATTTTGGTCTAAGCAAGCTTATTAAGGTTCAGAATTCTCACGATGTGTACAAGATGACTGGGGAGACTGGAAGCTATCGATATATGGCTCCAGAAGTTTTCAAGCACCGGAAATATGACAAGAAAGTTGATGTTTTCTCTTTTGCAATGATTCTGTATGAGATGCTTGAAGGGGAGCCACCTTTTGCTGGTTACGAGCCTTACGAGGCAGCCAGATATGTTGCAGATGGAAATAGACCGCCTTTTCGAGCAAAAGGATTCATCTCTGAACTGAAAGAATTAACAGAGCAATGTTGGGCTGCTGATATGAATCAAAGGCCTTCCTTCTTGGAAATCCTCAAGAAACTTGAAAAGATCAAGGAGAACCTGCCCCCGGACCATCACTGGACCTTATTCAATTCCTAA 1329 44.62 RSDSASFLFLMNSETSGGGAKGGPSVPADKEKQKEKARVSRTSLILWHAHQNDTAAVRKLLEEDRSLVQARDYDSRTPLHVASLHGWIDVAKCLIEYGADVNAQDRWKNTPLADAEGAKKQVMVELLKSFGGLSYGQNGSHFEPKPVPPPLPNKCDWEIDPSELDFSNAYIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSSSAAINFALDIARGMAYLHNEPNVIVHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPFAGYEPYEAARYVADGNRPPFRAKGFISELKELTEQCWAADMNQRPSFLEILKKLEKIKENLPPDHHWTLFNS 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12338750 12344166 + Bda007701.1 Bda11g01201 16309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01201 442 PRINTS Tyrosine kinase catalytic domain signature 279 297 IPR001245 GO:0004672|GO:0006468
Bda11g01201 442 PRINTS Tyrosine kinase catalytic domain signature 241 254 IPR001245 GO:0004672|GO:0006468
Bda11g01201 442 PRINTS Tyrosine kinase catalytic domain signature 395 417 IPR001245 GO:0004672|GO:0006468
Bda11g01201 442 PANTHER SERINE/THREONINE-PROTEIN KINASE STY8-LIKE 25 434 - -
Bda11g01201 442 Gene3D - 19 139 IPR036770 -
Bda11g01201 442 PIRSF ILK 10 442 - -
Bda11g01201 442 ProSitePatterns Protein kinases ATP-binding region signature. 172 193 IPR017441 GO:0005524
Bda11g01201 442 MobiDBLite consensus disorder prediction 1 35 - -
Bda11g01201 442 CDD STKc_MAP3K-like 172 424 - -
Bda11g01201 442 ProSiteProfiles Protein kinase domain profile. 166 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01201 442 Pfam Ankyrin repeats (3 copies) 41 105 IPR002110 GO:0005515
Bda11g01201 442 SMART ANK_2a 74 103 IPR002110 GO:0005515
Bda11g01201 442 ProSiteProfiles Ankyrin repeat region circular profile. 74 106 - -
Bda11g01201 442 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 25 434 - -
Bda11g01201 442 Gene3D Phosphorylase Kinase; domain 1 151 245 - -
Bda11g01201 442 ProSitePatterns Serine/Threonine protein kinases active-site signature. 285 297 IPR008271 GO:0004672|GO:0006468
Bda11g01201 442 SUPERFAMILY Protein kinase-like (PK-like) 164 437 IPR011009 -
Bda11g01201 442 Pfam Protein tyrosine and serine/threonine kinase 171 424 IPR001245 GO:0004672|GO:0006468
Bda11g01201 442 SMART serkin_6 166 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01201 442 ProSiteProfiles Ankyrin repeat profile. 74 106 IPR002110 GO:0005515
Bda11g01201 442 SUPERFAMILY Ankyrin repeat 45 131 IPR036770 -
Bda11g01201 442 Gene3D Transferase(Phosphotransferase) domain 1 246 436 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda07g00956 Bda-Chr7:11072390 Bda11g01201 Bda-Chr11:12338750 2.23E-105 dispersed
Bda11g01201 Bda-Chr11:12338750 Bda15g00444 Bda-Chr15:7493005 1.97E-73 dispersed
Bda13g00370 Bda-Chr13:4572259 Bda11g01201 Bda-Chr11:12338750 1.16E-22 dispersed
Bda13g00377 Bda-Chr13:4682138 Bda11g01201 Bda-Chr11:12338750 1.20E-22 dispersed
Bda10g01071 Bda-Chr10:44708023 Bda11g01201 Bda-Chr11:12338750 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69923 PF07714 PK_Tyr_Ser-Thr 4.80E-65 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01201 - - rcu:8281850 770.385