Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01201 | CGATCTGATTCTGCTTCATTTTTGTTTCTGATGAACTCCGAGACGTCTGGCGGCGGAGCCAAGGGAGGCCCGTCCGTGCCTGCTGACAAGGAGAAGCAGAAGGAGAAAGCTCGAGTGAGCAGAACGTCGCTGATATTGTGGCACGCTCATCAGAATGACACCGCTGCGGTTCGCAAGCTGTTGGAGGAGGATCGATCCCTGGTCCAAGCTAGAGACTACGATAGTCGCACTCCTCTTCATGTCGCTTCACTCCATGGTTGGATCGATGTCGCCAAGTGCTTGATTGAGTATGGTGCTGATGTCAACGCCCAGGATCGCTGGAAGAACACTCCTCTAGCTGATGCGGAAGGAGCTAAAAAGCAAGTGATGGTTGAGCTTTTGAAGTCATTTGGGGGTCTGTCTTATGGCCAAAATGGAAGCCATTTTGAACCAAAACCTGTACCTCCTCCTCTACCAAACAAGTGTGATTGGGAAATTGACCCTTCTGAACTGGACTTCTCAAATGCATATATTATTGGCAAGGGTTCTTTTGGAGAGATATTAAAAGCTTATTGGCGTGGAACTCCAGTAGCTGTCAAACGCATTCTTCCTTCTCTGTCAGATGATAGATTGGTGATTCAAGACTTTAGGCATGAAGTTAATTTGCTGGTGAAGCTTCGACATCCAAATGTAGTCCAATTTCTAGGTGCTGTCACAGAGAAGAAGCCTCTTATGTTGATTACTGAATATTTAAGAGGGGGGGATCTTCATCAGTACCTGAAAGACAAAGGTTCACTAAGTAGCTCAGCAGCCATCAATTTTGCATTGGATATTGCTAGAGGCATGGCTTATCTTCATAATGAACCTAATGTCATTGTTCATCGAGACTTAAAACCAAGGAATGTGCTTTTAGTCAATTCTGGTGCTGACCATTTAAAAGTTGGAGATTTTGGTCTAAGCAAGCTTATTAAGGTTCAGAATTCTCACGATGTGTACAAGATGACTGGGGAGACTGGAAGCTATCGATATATGGCTCCAGAAGTTTTCAAGCACCGGAAATATGACAAGAAAGTTGATGTTTTCTCTTTTGCAATGATTCTGTATGAGATGCTTGAAGGGGAGCCACCTTTTGCTGGTTACGAGCCTTACGAGGCAGCCAGATATGTTGCAGATGGAAATAGACCGCCTTTTCGAGCAAAAGGATTCATCTCTGAACTGAAAGAATTAACAGAGCAATGTTGGGCTGCTGATATGAATCAAAGGCCTTCCTTCTTGGAAATCCTCAAGAAACTTGAAAAGATCAAGGAGAACCTGCCCCCGGACCATCACTGGACCTTATTCAATTCCTAA | 1329 | 44.62 | RSDSASFLFLMNSETSGGGAKGGPSVPADKEKQKEKARVSRTSLILWHAHQNDTAAVRKLLEEDRSLVQARDYDSRTPLHVASLHGWIDVAKCLIEYGADVNAQDRWKNTPLADAEGAKKQVMVELLKSFGGLSYGQNGSHFEPKPVPPPLPNKCDWEIDPSELDFSNAYIIGKGSFGEILKAYWRGTPVAVKRILPSLSDDRLVIQDFRHEVNLLVKLRHPNVVQFLGAVTEKKPLMLITEYLRGGDLHQYLKDKGSLSSSAAINFALDIARGMAYLHNEPNVIVHRDLKPRNVLLVNSGADHLKVGDFGLSKLIKVQNSHDVYKMTGETGSYRYMAPEVFKHRKYDKKVDVFSFAMILYEMLEGEPPFAGYEPYEAARYVADGNRPPFRAKGFISELKELTEQCWAADMNQRPSFLEILKKLEKIKENLPPDHHWTLFNS | 442 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12338750 | 12344166 | + | Bda007701.1 | Bda11g01201 | 16309 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01201 | 442 | PRINTS | Tyrosine kinase catalytic domain signature | 279 | 297 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01201 | 442 | PRINTS | Tyrosine kinase catalytic domain signature | 241 | 254 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01201 | 442 | PRINTS | Tyrosine kinase catalytic domain signature | 395 | 417 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01201 | 442 | PANTHER | SERINE/THREONINE-PROTEIN KINASE STY8-LIKE | 25 | 434 | - | - | |
Bda11g01201 | 442 | Gene3D | - | 19 | 139 | IPR036770 | - | |
Bda11g01201 | 442 | PIRSF | ILK | 10 | 442 | - | - | |
Bda11g01201 | 442 | ProSitePatterns | Protein kinases ATP-binding region signature. | 172 | 193 | IPR017441 | GO:0005524 | |
Bda11g01201 | 442 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Bda11g01201 | 442 | CDD | STKc_MAP3K-like | 172 | 424 | - | - | |
Bda11g01201 | 442 | ProSiteProfiles | Protein kinase domain profile. | 166 | 438 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01201 | 442 | Pfam | Ankyrin repeats (3 copies) | 41 | 105 | IPR002110 | GO:0005515 | |
Bda11g01201 | 442 | SMART | ANK_2a | 74 | 103 | IPR002110 | GO:0005515 | |
Bda11g01201 | 442 | ProSiteProfiles | Ankyrin repeat region circular profile. | 74 | 106 | - | - | |
Bda11g01201 | 442 | PANTHER | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED | 25 | 434 | - | - | |
Bda11g01201 | 442 | Gene3D | Phosphorylase Kinase; domain 1 | 151 | 245 | - | - | |
Bda11g01201 | 442 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 285 | 297 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g01201 | 442 | SUPERFAMILY | Protein kinase-like (PK-like) | 164 | 437 | IPR011009 | - | |
Bda11g01201 | 442 | Pfam | Protein tyrosine and serine/threonine kinase | 171 | 424 | IPR001245 | GO:0004672|GO:0006468 | |
Bda11g01201 | 442 | SMART | serkin_6 | 166 | 428 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01201 | 442 | ProSiteProfiles | Ankyrin repeat profile. | 74 | 106 | IPR002110 | GO:0005515 | |
Bda11g01201 | 442 | SUPERFAMILY | Ankyrin repeat | 45 | 131 | IPR036770 | - | |
Bda11g01201 | 442 | Gene3D | Transferase(Phosphotransferase) domain 1 | 246 | 436 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00956 | Bda-Chr7:11072390 | Bda11g01201 | Bda-Chr11:12338750 | 2.23E-105 | dispersed | |
Bda11g01201 | Bda-Chr11:12338750 | Bda15g00444 | Bda-Chr15:7493005 | 1.97E-73 | dispersed | |
Bda13g00370 | Bda-Chr13:4572259 | Bda11g01201 | Bda-Chr11:12338750 | 1.16E-22 | dispersed | |
Bda13g00377 | Bda-Chr13:4682138 | Bda11g01201 | Bda-Chr11:12338750 | 1.20E-22 | dispersed | |
Bda10g01071 | Bda-Chr10:44708023 | Bda11g01201 | Bda-Chr11:12338750 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69923 | PF07714 | PK_Tyr_Ser-Thr | 4.80E-65 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01201 | - | - | rcu:8281850 | 770.385 |