Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01215 ATGCGAAGATCGATTGTACGTATACAGGGGGACTGTAAACCTGAAAGCAACAGTAACATTATGGATCCGATCAAGCTTCATATACGATCTAGCTCCCGTTCCAATCTGTTTACACGAAATTCCGCAAAGCATGCAACCAAATCCAAGTTGTTGATTTCTGCAGCGTGTGCGCTGGTCTTGGCTTTGTTATTTTGCTATTTATTTTTGTCTACTAAAAATGTTTGGAGCTCCGAGAAGAGAAGGTACGGAATTGTTATCGATGGAGGTAGTACGGGCACCCGAATCCATGTATTTACATACAAAGTGGAAGGAAATAATGCGGTATTTGATTTCGGGAAGGAGGGGTTAGCATCAATGAGGCTGAATCCTGGACTGTCCGCGTATGCAGACGATCCAGATGAGGCGGGGAATTCAATTGGGGAGCTATTGGAGTTTGCCAGGGAACGGATTCCAAAGAACCAATGGGGGAGTACTGAAATACAGTTAATGGCGACTGCAGGATTGAGGATACTTGAATCGGGTGTGCAGGAACAGATATTGCAGTCGTGTCGTCAGGTCCTTCGATCATCAGGGTTTAAGTTTCAGGATGATTGGGCAAAGGTTATCTCTGGCTCCGATGAAGGTATTTTCGCTTGGGTTGTTGCAAACTATGCCCTTGGCACCCTCGGAGGTGATCCTCAAGAGACTACTGGGATTATTGAACTTGGCGGGGCTTCAGCACAGGTAACATTTGTTTCAAGTGACCCAGTACCTCCCGAGTTCTCTAATACAATTAAATTCCGCAATGTATCTTATAATCTATATAGCCACAGCTTTCTTCATTTTGGCCAGAATGCGGCACATGACTCATTAAGAGAAGCTCTACTTTCAAGAGATTTTAACTTAGTTACTAGATCTCTTCGAGAGGGGATGCTTATAGATCCATGTGCTCCCAAAGGGTACTCGCAGAGCATCCAGTCGTGGACTATGTCTCCTGATTCTTTGAGTGGAGGAAGAGAATACTTAACCACCGTTCATTCCAGAGGAAATTTCTCAGAGTGCCGATCTGCTGCATTAGAGATGTTGCAGAAAGGAAAAGAGAAATGTTCCTATCAGCATTGCAACATCGGATCTACTTTCATACCCAAGCTCAGGGGAAAGTTTTTTGCCACAGAAAATTTCTTCTATACATCAAAGTTCTTTCATTTGGACTCAAGGGCATTTCTTTCTGATCTCATGATGGCTGGAGAACAATTCTGTGGGCAAGACTGGTCACAATTGAAAAAGAGGTATAAAACGCTTAGTGAAGAAGATTTGCTTCGATATTGCTTCTCATCGGCTTACATTGTGGCCCTACTTCACGACGGGCTTGGAATTGCTTTAGACGACCAAAGTATTGTGGTGGCTAATAACGTGGAAAAAATTCCACTTGATTGGGCGTTGGGAGCCTTTATCTTACAAAGCACGAAGGCCATAAACGGCGAGAATTCCGGCTGGATTGCCAACATCATCAGCTACGAATCACCCACTTTGCTATCACTCATTGCCATCTCTATGCTCCTGTTGTTTATAGCATGGTCTATATCAAAATTGAGGAAACCTGAGTTAAAGACGATTTACGATCTAGAGAAAGGAAGATACATTGTTACCCGAGTCAATAGATTCTGA 1647 43.47 MRRSIVRIQGDCKPESNSNIMDPIKLHIRSSSRSNLFTRNSAKHATKSKLLISAACALVLALLFCYLFLSTKNVWSSEKRRYGIVIDGGSTGTRIHVFTYKVEGNNAVFDFGKEGLASMRLNPGLSAYADDPDEAGNSIGELLEFARERIPKNQWGSTEIQLMATAGLRILESGVQEQILQSCRQVLRSSGFKFQDDWAKVISGSDEGIFAWVVANYALGTLGGDPQETTGIIELGGASAQVTFVSSDPVPPEFSNTIKFRNVSYNLYSHSFLHFGQNAAHDSLREALLSRDFNLVTRSLREGMLIDPCAPKGYSQSIQSWTMSPDSLSGGREYLTTVHSRGNFSECRSAALEMLQKGKEKCSYQHCNIGSTFIPKLRGKFFATENFFYTSKFFHLDSRAFLSDLMMAGEQFCGQDWSQLKKRYKTLSEEDLLRYCFSSAYIVALLHDGLGIALDDQSIVVANNVEKIPLDWALGAFILQSTKAINGENSGWIANIISYESPTLLSLIAISMLLLFIAWSISKLRKPELKTIYDLEKGRYIVTRVNRF 548
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12514008 12517305 + Bda007722.1 Bda11g01215 16323

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01215 548 PANTHER APYRASE 6-RELATED 32 543 - -
Bda11g01215 548 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 32 543 IPR000407 GO:0016787
Bda11g01215 548 Gene3D - 81 478 - -
Bda11g01215 548 Pfam GDA1/CD39 (nucleoside phosphatase) family 76 483 IPR000407 GO:0016787
Bda11g01215 548 Gene3D Exopolyphosphatase. Domain 2 203 466 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01215 K01510 ENTPD1_3_8, CD39; apyrase [EC:3.6.1.5] - jre:108988782 748.429
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g00559 Bda-Chr3:4642568 Bda11g01215 Bda-Chr11:12514008 6.69E-44 dispersed
Bda08g00439 Bda-Chr8:4399409 Bda11g01215 Bda-Chr11:12514008 2.26E-38 dispersed
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g917 . Blo16g01115 . Bda11g01215 Bpe13g01410 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Cone6ag0583 Cone9ag0586 . . . . . . . Bda11g01215 . . . Bma06g00686 . . . . . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0006326 1 1 1 2 1 1 2 1 1 1 1 1 2 1 1 2 1 2 2 1 1 1 1 1 1 2 1 2 1 1 38
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bda11g01215 Bda_Chr11 FPKM 0.388889 0.145418 0.04415 0.042268 0.0 0.219239 0.169105 0.229038 0.386388