Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01227 ATGACTAGCAATTGGATGGCTTTCTTCCCTGCAAATTTCATGCCACAAGCTCCCCATGAAGATGAACATCAACCTCCCACTACTCTTAACCCAATTCTTCACTCATGTACTCCTCAAGACTTTCATGGTATTCTCTCTCTCTATAATTATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAAACCTTCAACTTGTGGTTGCAGGAGTGACATCGTTTCTAGGAAAGAGATCCAGGTCGTTTTCGGGAATTGAAATGGGGGAAGAAGCAAACAATGGGGAGGACGATTTGTCGGACGATGGATCACTTGCAGGAGAGAAGAAGAGGAGGCTTAATATGGAGCAGGTGAAAACTCTTGAGAAGAACTTCGAGCTGGGAAATAAGCTGGAGCCCGAGAGAAAAATGCAGTTGGCTCGAGCTCTTAATCTGCAGCCACGGCAGATTGCGATTTGGTTTCAGAACAGAAGAGCAAGGTGGAAGACGAAGCAGTTGGAGAAAGATTATGATCTTCTTAAACGACAGTTTGAAGCCATTAAAGCCGATAACGAAGCTCTACAAACCCAGAATCAAAAGCTTCAGGCAGAGATTATGGGTCTGAAAAATAGAGAACCAACCGAATCGATCAATCTGAACAAAGAAACAGAAGGATCATGCAGCAATCGGAGCGAGAACAGCTCCGACATAAAACTGGATATCTCCAGAACACCAGCCATTGATAGTCCTTTACCCACGAGCAGACCTTTATTTCCGGCCGCAATTAGAGCTCCCGCTGTCGCTCAGCTCTTTCAGAACCCATCGAGATCTGAACTCCATTGCCATAAAGTAGATCAAATAGGCAAAGAAGAAAGCCTGAGCAACATGTTTTGCGGGATCGAGGATCAGTCCGGCGGACTGTGGCCATGGTTGGAGAATCAACATTTTAAT 924 45.13 MTSNWMAFFPANFMPQAPHEDEHQPPTTLNPILHSCTPQDFHGILSLYNYFSLSLSLSLSLNLQLVVAGVTSFLGKRSRSFSGIEMGEEANNGEDDLSDDGSLAGEKKRRLNMEQVKTLEKNFELGNKLEPERKMQLARALNLQPRQIAIWFQNRRARWKTKQLEKDYDLLKRQFEAIKADNEALQTQNQKLQAEIMGLKNREPTESINLNKETEGSCSNRSENSSDIKLDISRTPAIDSPLPTSRPLFPAAIRAPAVAQLFQNPSRSELHCHKVDQIGKEESLSNMFCGIEDQSGGLWPWLENQHFN 308
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12694178 12695424 + Bda033141 Bda11g01227 16335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01227 308 Gene3D - 100 168 - -
Bda11g01227 308 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 4 53 IPR045224 GO:0003700
Bda11g01227 308 CDD homeodomain 107 163 IPR001356 GO:0003677
Bda11g01227 308 SMART HOX_1 105 166 IPR001356 GO:0003677
Bda11g01227 308 MobiDBLite consensus disorder prediction 199 228 - -
Bda11g01227 308 ProSiteProfiles 'Homeobox' domain profile. 102 162 IPR001356 GO:0003677
Bda11g01227 308 Pfam Homeobox associated leucine zipper 162 202 IPR003106 GO:0006355|GO:0043565
Bda11g01227 308 MobiDBLite consensus disorder prediction 210 228 - -
Bda11g01227 308 ProSitePatterns 'Homeobox' domain signature. 137 160 IPR017970 GO:0000981|GO:0006355
Bda11g01227 308 SUPERFAMILY Homeodomain-like 105 164 IPR009057 -
Bda11g01227 308 Coils Coil 154 202 - -
Bda11g01227 308 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 4 53 - -
Bda11g01227 308 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-13 67 308 - -
Bda11g01227 308 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 67 308 IPR045224 GO:0003700
Bda11g01227 308 Pfam Homeodomain 107 160 IPR001356 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02167 Bda11g01227 CCT
Bda07g01460 Bda11g01227 CCT
Bda01g02167 Bda11g01227 BCT
Bda07g01460 Bda11g01227 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01227 Bda-Chr11:12694178 Bda04g00102 Bda-Chr4:2183130 3.31E-38 dispersed
Bda14g01299 Bda-Chr14:14333252 Bda11g01227 Bda-Chr11:12694178 2.00E-23 dispersed
Bda01g02167 Bda-Chr1:57581698 Bda11g01227 Bda-Chr11:12694178 0 wgd
Bda11g01227 Bda-Chr11:12694178 Bda07g01460 Bda-Chr7:27137122 1.20E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16677 PF00046 Homeodomain 7.90E-15 CL0123 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01227 K09338 - qsu:112032056 454.136