Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01231 | ATGCAGCGGCTACACTTGCTATCTTCTTCTTTTTCTTCTTCATTTGCTGCTCCTCAAAACCCTGAAACTTGTCCTTTCCTTAAGCTTTCCTCCAACTATCCGTCTAGAAGCTTCTTTCTCAACTTCAATGCCCACCGGCCTCTTCCAACGCACTCCACAAGCTGGAAGCTCTCTGTGAAATGCCGGTACTCTGAGTACTTCGACCAGCAGCAGAAGAAGCAGTCTGGATTCGACGCCGGAACTTCTCCGAATAACAATTCTGCTCCACAGTCTCGGCCTGGAGCTTCTGTAGCGTTGCCAACTAGGTACTTCGTGGGTCATTCAATATACAAAGGGAAGGCAGCTCTTACGGTGGAGCCACGGGCGCCAGAGTTTACTTCTCTAGATTCAGGAGCGTTCAAACTATCAAAGGAGGGCGTTGTTGTTCTTCAGTTTGCGCCCGCAGCTGGTGTTCGTCAATATGATTGGAGCAAAAAACAGGTATTCTCTTTGTCAGTGACTGAAATTGGGAGTCTTGTTGCCCTTGGCCCAAGAGATTCGTGTGAATTTTTCCACGACCCTTTTAAAGGAAAAAGTGAGGAAGGGAAAGTTAGGAAGGTATTGAAAGTGGAGCCCCTTCCAGATGGTTCTGGTCATTTCTTCAACATCAGTGTTCAGAACAAGCTTATCAACATGGACGAGAGTATTTATATTCCTGTCAGCAAAGCAGAATACGCTGTACTTGTCTCAGCATTCAATTTTATCTTACCATATCTTCTAGGATGGCATGCCTACGCCAATTCCATCAAGCCCGAAGATTCGAACCGTGTTAATAGCGCCAATTCTAGGTATGGCGACTACGAATGGAACAAGTAG | 855 | 46.2 | MQRLHLLSSSFSSSFAAPQNPETCPFLKLSSNYPSRSFFLNFNAHRPLPTHSTSWKLSVKCRYSEYFDQQQKKQSGFDAGTSPNNNSAPQSRPGASVALPTRYFVGHSIYKGKAALTVEPRAPEFTSLDSGAFKLSKEGVVVLQFAPAAGVRQYDWSKKQVFSLSVTEIGSLVALGPRDSCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGHFFNISVQNKLINMDESIYIPVSKAEYAVLVSAFNFILPYLLGWHAYANSIKPEDSNRVNSANSRYGDYEWNK | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 12838065 | 12840618 | - | Bda007740.1 | Bda11g01231 | 16339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01231 | 284 | MobiDBLite | consensus disorder prediction | 74 | 95 | - | - | |
Bda11g01231 | 284 | Pfam | Whirly transcription factor | 109 | 243 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Bda11g01231 | 284 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC | 47 | 283 | - | - | |
Bda11g01231 | 284 | PANTHER | SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL | 47 | 283 | IPR013742 | GO:0003697|GO:0006355|GO:0006952 | |
Bda11g01231 | 284 | MobiDBLite | consensus disorder prediction | 74 | 94 | - | - | |
Bda11g01231 | 284 | Gene3D | Transcriptional Coactivator Pc4; Chain A | 96 | 274 | IPR009044 | GO:0003677|GO:0006355 | |
Bda11g01231 | 284 | SUPERFAMILY | ssDNA-binding transcriptional regulator domain | 102 | 282 | IPR009044 | GO:0003677|GO:0006355 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01231 | Bda-Chr11:12838065 | Bda03g00364 | Bda-Chr3:3055279 | 2.06E-26 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16678 | PF08536 | Whirly | 5.90E-61 | CL0609 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01231 | - | - | mnt:112091579 | 372.089 |