Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01235 ATGGAGAAAGAAGCTGGGAATGGTACAGTTGAGGGTTGGGAGATGAAAGATTCAAATGGAAAGAAGAATAAGGGAAATGCTGAGGAGGAGGAAGAAGAAGTGGTTGGGTGTTGGACTGCTCTGAAAATTTTTGGAAGTTGCATTTCTTCTAGATCCAAAGTTGATAGCTCAGTGTCTGGAACGGGAACCAGTACTGTTTATGCTGAAAATAAATCAGCAACTGACACAAGCAGAGATCAACCGGCAATTACTGGAGTATCTTCAACGACGACTAGCAACAGCAATGGAGAGAGTAATTCATCCAATTCCAAGCTCGAAGAGGAACTTAAAATTTCTCCTTGTCTTCGAAAATTTGCATTTAATGATCTTAAGTTAGCAACAAGAAATTTTAGGCCTGAGAGCCTTCTTGGAGAAGGTGGTTTTGGCTGTGTCTTCAAGGGCTGGATTGAAGAAAATGGAACTGCTCCTGTAAAGCCCGGTACAGGACTTACTGTTGCCGTCAAGACCCTTAACCTCGATGGCCTTCAGGGTCACAAAGAATGGATGGCTGAAGTAAATTTTCTTAGTGACCTTGTACATCCTAACTTGGTAAAACTTATCGGTTACTGCTGTGACGATGATCAGAGGTTGCTAGTATATGAATTTATGCCACGAGGAAGCTTGGAAAATCACCTTTTCCGAAGGTCCCTGCCTCTTCCTTGGTCTATGAGAATCAAAATTGCATTAGGTGCTGCAAAGGGTCTCGCTTTTCTTCACGAGGAAGCAAAAAGGCCTGTCATATACCGTGATTTTAAGACATCAAACATCCTACTTGATGCAGACTACAATGCCAAGCTCTCTGATTTTGGACTCGCCAAAGATGGTCCTGAGGGAGACAAAACCCATGTCTCTACTCGTGTCATGGGAACGTATGGTTATGCAGCCCCTGAATATGTAATGACTGGACATCTCACGTCTAAGAGCGATGTGTACAGTTTTGGTGTAGTTCTTCTCGAAATGTTAACCGGGAGAAGATCTATGGACAAAAACAGACCCAATGGAGAGCATAATCTGGTCGAATGGGCTCGGCCATATCTCGGAGAGAGAAAACGGTTTTACCGATTGATCGATCCAAGGCTCGAAGGTCACTTTTCGATAAAGGGTGCTCAGAGAGCGACTCAATTGGCTGCACACTGCCTGACCCGAGACCCAAAAAGCCGGCCATTGATGAGCGAAGTTGTCGAAGCATTAAAGCCGCTGCCAAACCTCAAGGACATGGCCAGCTCGTCATACTATTTTCAGAATATGGCAGTGAGCTCAAATGTTAAAAATGGTGGGATTATTCAAGGAGGATCATATTCAAGGAATGGACCGTTGCTTAGAAGCCCTTCTGTTCTGAATGGTTCTCATGTTTCTCCTTATCACCATAAGCATCATCATCCTCATCCTTCTCCTAAGCCTGTTGTTAAATCATAA 1455 43.85 MEKEAGNGTVEGWEMKDSNGKKNKGNAEEEEEEVVGCWTALKIFGSCISSRSKVDSSVSGTGTSTVYAENKSATDTSRDQPAITGVSSTTTSNSNGESNSSNSKLEEELKISPCLRKFAFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNLDGLQGHKEWMAEVNFLSDLVHPNLVKLIGYCCDDDQRLLVYEFMPRGSLENHLFRRSLPLPWSMRIKIALGAAKGLAFLHEEAKRPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKNRPNGEHNLVEWARPYLGERKRFYRLIDPRLEGHFSIKGAQRATQLAAHCLTRDPKSRPLMSEVVEALKPLPNLKDMASSSYYFQNMAVSSNVKNGGIIQGGSYSRNGPLLRSPSVLNGSHVSPYHHKHHHPHPSPKPVVKS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12856575 12860353 - Bda007743.1 Bda11g01235 16343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01235 484 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 61 472 - -
Bda11g01235 484 CDD STKc_IRAK 136 413 - -
Bda11g01235 484 Gene3D Transferase(Phosphotransferase) domain 1 216 433 - -
Bda11g01235 484 MobiDBLite consensus disorder prediction 452 484 - -
Bda11g01235 484 MobiDBLite consensus disorder prediction 69 105 - -
Bda11g01235 484 MobiDBLite consensus disorder prediction 465 484 - -
Bda11g01235 484 PANTHER OS01G0588500 PROTEIN-RELATED 61 472 - -
Bda11g01235 484 Gene3D Phosphorylase Kinase; domain 1 88 215 - -
Bda11g01235 484 ProSiteProfiles Protein kinase domain profile. 130 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01235 484 SUPERFAMILY Protein kinase-like (PK-like) 106 410 IPR011009 -
Bda11g01235 484 MobiDBLite consensus disorder prediction 1 31 - -
Bda11g01235 484 Pfam Protein tyrosine and serine/threonine kinase 134 410 IPR001245 GO:0004672|GO:0006468
Bda11g01235 484 ProSitePatterns Serine/Threonine protein kinases active-site signature. 259 271 IPR008271 GO:0004672|GO:0006468
Bda11g01235 484 ProSitePatterns Protein kinases ATP-binding region signature. 136 168 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02251 Bda11g01235 CCT
Bda01g02251 Bda11g01235 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g02279 Bda-Chr1:59176807 Bda11g01235 Bda-Chr11:12856575 0 dispersed
Bda11g01016 Bda-Chr11:9939038 Bda11g01235 Bda-Chr11:12856575 1.19E-139 dispersed
Bda11g01235 Bda-Chr11:12856575 Bda14g01130 Bda-Chr14:10306558 0 dispersed
Bda14g00067 Bda-Chr14:528640 Bda11g01235 Bda-Chr11:12856575 5.30E-109 dispersed
Bda14g00951 Bda-Chr14:7638642 Bda11g01235 Bda-Chr11:12856575 2.91E-128 dispersed
Bda11g01229 Bda-Chr11:12805584 Bda11g01235 Bda-Chr11:12856575 2.33E-147 proximal
Bda01g01952 Bda-Chr1:55934194 Bda11g01235 Bda-Chr11:12856575 1.30E-173 transposed
Bda03g01442 Bda-Chr3:51911094 Bda11g01235 Bda-Chr11:12856575 3.14E-59 transposed
Bda01g02251 Bda-Chr1:58286972 Bda11g01235 Bda-Chr11:12856575 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69925 PF07714 PK_Tyr_Ser-Thr 1.50E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01235 - - qsu:112039412 698.353