Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01245 GCGGGCGGAGAAACGATGCCGTCACACTCGGATCTGGACCGTCAGATCGAGCACCTGATGGAGTGCAAGCCGTTGCCTGAAGCAGAGGTTAAGACGCTCTGCGATCAGGCTAGGACGATTCTCGTAGAGGAGTGGAACGTACAGCATGTGAAGTGCCCTGTGACAGTTTGTGGAGATATCCACGGGCAGTTCTATGACCTCCTTGAACTGTTTCGGATAGGAGGAAATGCGCCGGACACAAATTATCTCTTTATGGGCGATTATGTTGATCGTGGATACTACTCTGTGGAGACTGTCACACTTTTAGTGGCTTTAAAGGTTCGTTATAGAGATAGAATTACAATCTTGAGGGGAAATCATGAGAGCAGACAAATTACTCAAGTTTATGGATTTTATGATGAATGCTTGCGGAAATATGGAAATGCCAATGTCTGGAAATACTTTACTGATCTTTTTGATTATCTACCTCTGACAGCTCTTATTGAGAGTCAGATATTCTGTTTGCATGGAGGACTTTCACCCTCTCTAGATACCTTAGATAATATACGGACATTGGATCGCATACAAGAGGTACCACATGAAGGACCCATGTGTGACCTTTTGTGGTCTGATCCCGATGATCGATGTGGGTGGGGAATATCTCCACGTGGAGCTGGTTATACATTTGGGCAGGATATAGCTGCTCAGTTCAACCATATTAATGGGCTCTCTCTGATATCAAGAGCACATCAACTTGTTATGGAAGGTTACAACTGGTGTCAGGAGAAGAATGTGGTGACTGTTTTTAGTGCTCCAAACTATTGCTACCGATGCGGAAACATGGCTGCAATATTGGAGATCGGGGAGAATATGGATCAGAATTTTCTACAATTTGACCCTGCCCCTCGTCAAATTGAACCCGATGCTACACGCAAGACTCCTGATTATTTTCTCTGA 936 44.76 AGGETMPSHSDLDRQIEHLMECKPLPEAEVKTLCDQARTILVEEWNVQHVKCPVTVCGDIHGQFYDLLELFRIGGNAPDTNYLFMGDYVDRGYYSVETVTLLVALKVRYRDRITILRGNHESRQITQVYGFYDECLRKYGNANVWKYFTDLFDYLPLTALIESQIFCLHGGLSPSLDTLDNIRTLDRIQEVPHEGPMCDLLWSDPDDRCGWGISPRGAGYTFGQDIAAQFNHINGLSLISRAHQLVMEGYNWCQEKNVVTVFSAPNYCYRCGNMAAILEIGENMDQNFLQFDPAPRQIEPDATRKTPDYFL 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12972761 12975499 + Bda007756.1 Bda11g01245 16353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01245 311 SMART pp2a_7 25 295 IPR006186 GO:0016787
Bda11g01245 311 CDD MPP_PP2A_PP4_PP6 11 295 - -
Bda11g01245 311 Gene3D - 4 311 IPR029052 -
Bda11g01245 311 Pfam Calcineurin-like phosphoesterase 53 244 IPR004843 GO:0016787
Bda11g01245 311 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 6 311 - -
Bda11g01245 311 ProSitePatterns Serine/threonine specific protein phosphatases signature. 116 121 IPR006186 GO:0016787
Bda11g01245 311 SUPERFAMILY Metallo-dependent phosphatases 9 297 IPR029052 -
Bda11g01245 311 PRINTS Serine/threonine phosphatase family signature 53 80 IPR006186 GO:0016787
Bda11g01245 311 PRINTS Serine/threonine phosphatase family signature 115 139 IPR006186 GO:0016787
Bda11g01245 311 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Bda11g01245 311 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Bda11g01245 311 PRINTS Serine/threonine phosphatase family signature 235 255 IPR006186 GO:0016787
Bda11g01245 311 PRINTS Serine/threonine phosphatase family signature 257 273 IPR006186 GO:0016787
Bda11g01245 311 PRINTS Serine/threonine phosphatase family signature 82 109 IPR006186 GO:0016787
Bda11g01245 311 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 311 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda01g02171 Bda11g01245 CCT
Bda01g02171 Bda11g01245 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda05g01104 Bda-Chr5:59341975 Bda11g01245 Bda-Chr11:12972761 0 dispersed
Bda07g00380 Bda-Chr7:4799217 Bda11g01245 Bda-Chr11:12972761 5.09E-156 dispersed
Bda07g00714 Bda-Chr7:8393799 Bda11g01245 Bda-Chr11:12972761 0 dispersed
Bda09g00410 Bda-Chr9:5105731 Bda11g01245 Bda-Chr11:12972761 1.12E-156 dispersed
Bda11g01245 Bda-Chr11:12972761 Bda14g00472 Bda-Chr14:3390348 7.60E-129 dispersed
Bda01g02243 Bda-Chr1:58244699 Bda11g01245 Bda-Chr11:12972761 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01245 K04382 - rcu:8270352 634.795