Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01253 GAAGATAATGAAGAATCATCCTTGGCGATCATGTCCGTCTCGTGCTTGGATTGCTTCTCCGACCTACTCTGCGATGAGGACTCGTCGGAAATATTGTCAGAACAGTCTCCTGGAAACTCGATGGAACTTGAATCTCCGCCTTACATCGAGGAATCGATCGCCGGATTCATTGAAAATGAGACCCAGCTCTTAGAAGAGGATTGTTTATCTGGCTTTCAATCACAGTGGCTTGAGGCTTCTTCAAGAGCAGAGTCTGTTGCATGGATTCTCAAGGTTCAAGATCATTATGGCCTTCAACCAGTGACGGCGTACCTCTCCGTCAACTACCTGGATCGGTTCCTATATTCTCGCCGCTTGCCGCAAACAAATGGCTGGCCGATGCAACTCCTCTCTGTTGCTTGTCTGTCACTGGCTGCTAAAATGGAGGAAACACTGCTTCCTTCTTTATTGGATCTGCAGGTTGAAGGAGCGAAATACGTATTCGAACCTAAAACGATATTCAGGATGGAGCTCCTCGTGCTAAGGGTTTTAGAATGGCGATTACGATCCATAACTCCATTCAGCTTCATCAGTTTCTTCGCATGCAAGCTCGACCCGACGGCAGCTTTTATGGGATTTCTGATTTCACGAGCTAAGGAAATTATCCTGTCTAATATCCGAGAAGCTAGCTTTCTCGTATTCCGGCCGTCGTGCATGGCTGTTGCGGCCTTACTCTGTGCAGCAAATGAAATTCCAAATTTGTCGCTTGAAAATCCTGAAGAAGCTGAGATGTGGTGCAAAGGGCTCAGCAAAGAAAAAATCATGGGCTGCTACCGGTTAATGCAAGAATCTCTCCTCCACAACCGCCGGAGATCGACACCACCGAAGATAATACCACAGCTCCTGCTGACAACTATTCCGACTAGTTTCAGGTCCGATGATTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATCATCATCATCATCATCAGTCTTTTCGTCGCCACATAAAAGGAGAAAACTAGCTAACTGCTGA 1020 47.35 EDNEESSLAIMSVSCLDCFSDLLCDEDSSEILSEQSPGNSMELESPPYIEESIAGFIENETQLLEEDCLSGFQSQWLEASSRAESVAWILKVQDHYGLQPVTAYLSVNYLDRFLYSRRLPQTNGWPMQLLSVACLSLAAKMEETLLPSLLDLQVEGAKYVFEPKTIFRMELLVLRVLEWRLRSITPFSFISFFACKLDPTAAFMGFLISRAKEIILSNIREASFLVFRPSCMAVAALLCAANEIPNLSLENPEEAEMWCKGLSKEKIMGCYRLMQESLLHNRRRSTPPKIIPQLLLTTIPTSFRSDDSSSSSSSSSSSSSSSSSSVFSSPHKRRKLANC 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13122638 13124805 + Bda007768.1 Bda11g01253 16361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01253 339 MobiDBLite consensus disorder prediction 302 331 - -
Bda11g01253 339 Gene3D - 60 246 - -
Bda11g01253 339 PANTHER CYCLIN-D1-1 13 316 - -
Bda11g01253 339 Pfam Cyclin, N-terminal domain 56 181 IPR006671 -
Bda11g01253 339 ProSitePatterns Cyclins signature. 82 113 IPR006671 -
Bda11g01253 339 SMART Cyclin_C_2 184 317 IPR004367 -
Bda11g01253 339 Pfam Cyclin, C-terminal domain 184 284 IPR004367 -
Bda11g01253 339 PANTHER CYCLINS 13 316 IPR039361 -
Bda11g01253 339 SMART cyclin_7 87 175 IPR013763 -
Bda11g01253 339 Gene3D - 65 182 - -
Bda11g01253 339 SUPERFAMILY Cyclin-like 165 286 IPR036915 -
Bda11g01253 339 MobiDBLite consensus disorder prediction 302 339 - -
Bda11g01253 339 CDD CYCLIN 81 174 IPR013763 -
Bda11g01253 339 SUPERFAMILY Cyclin-like 47 181 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00683 Bda-Chr8:7267972 Bda11g01253 Bda-Chr11:13122638 1.18E-55 dispersed
Bda11g01253 Bda-Chr11:13122638 Bda13g01369 Bda-Chr13:36271879 1.04E-53 dispersed
Bda07g01568 Bda-Chr7:29111521 Bda11g01253 Bda-Chr11:13122638 1.60E-128 transposed
Bda01g02234 Bda-Chr1:58166437 Bda11g01253 Bda-Chr11:13122638 1.09E-165 wgd
Bda11g01253 Bda-Chr11:13122638 Bda07g01437 Bda-Chr7:26542392 9.50E-40 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01253 K18810 - tcc:18609384 401.749