Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01253 | GAAGATAATGAAGAATCATCCTTGGCGATCATGTCCGTCTCGTGCTTGGATTGCTTCTCCGACCTACTCTGCGATGAGGACTCGTCGGAAATATTGTCAGAACAGTCTCCTGGAAACTCGATGGAACTTGAATCTCCGCCTTACATCGAGGAATCGATCGCCGGATTCATTGAAAATGAGACCCAGCTCTTAGAAGAGGATTGTTTATCTGGCTTTCAATCACAGTGGCTTGAGGCTTCTTCAAGAGCAGAGTCTGTTGCATGGATTCTCAAGGTTCAAGATCATTATGGCCTTCAACCAGTGACGGCGTACCTCTCCGTCAACTACCTGGATCGGTTCCTATATTCTCGCCGCTTGCCGCAAACAAATGGCTGGCCGATGCAACTCCTCTCTGTTGCTTGTCTGTCACTGGCTGCTAAAATGGAGGAAACACTGCTTCCTTCTTTATTGGATCTGCAGGTTGAAGGAGCGAAATACGTATTCGAACCTAAAACGATATTCAGGATGGAGCTCCTCGTGCTAAGGGTTTTAGAATGGCGATTACGATCCATAACTCCATTCAGCTTCATCAGTTTCTTCGCATGCAAGCTCGACCCGACGGCAGCTTTTATGGGATTTCTGATTTCACGAGCTAAGGAAATTATCCTGTCTAATATCCGAGAAGCTAGCTTTCTCGTATTCCGGCCGTCGTGCATGGCTGTTGCGGCCTTACTCTGTGCAGCAAATGAAATTCCAAATTTGTCGCTTGAAAATCCTGAAGAAGCTGAGATGTGGTGCAAAGGGCTCAGCAAAGAAAAAATCATGGGCTGCTACCGGTTAATGCAAGAATCTCTCCTCCACAACCGCCGGAGATCGACACCACCGAAGATAATACCACAGCTCCTGCTGACAACTATTCCGACTAGTTTCAGGTCCGATGATTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTCATCATCATCATCATCATCAGTCTTTTCGTCGCCACATAAAAGGAGAAAACTAGCTAACTGCTGA | 1020 | 47.35 | EDNEESSLAIMSVSCLDCFSDLLCDEDSSEILSEQSPGNSMELESPPYIEESIAGFIENETQLLEEDCLSGFQSQWLEASSRAESVAWILKVQDHYGLQPVTAYLSVNYLDRFLYSRRLPQTNGWPMQLLSVACLSLAAKMEETLLPSLLDLQVEGAKYVFEPKTIFRMELLVLRVLEWRLRSITPFSFISFFACKLDPTAAFMGFLISRAKEIILSNIREASFLVFRPSCMAVAALLCAANEIPNLSLENPEEAEMWCKGLSKEKIMGCYRLMQESLLHNRRRSTPPKIIPQLLLTTIPTSFRSDDSSSSSSSSSSSSSSSSSSVFSSPHKRRKLANC | 339 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 13122638 | 13124805 | + | Bda007768.1 | Bda11g01253 | 16361 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01253 | 339 | MobiDBLite | consensus disorder prediction | 302 | 331 | - | - | |
Bda11g01253 | 339 | Gene3D | - | 60 | 246 | - | - | |
Bda11g01253 | 339 | PANTHER | CYCLIN-D1-1 | 13 | 316 | - | - | |
Bda11g01253 | 339 | Pfam | Cyclin, N-terminal domain | 56 | 181 | IPR006671 | - | |
Bda11g01253 | 339 | ProSitePatterns | Cyclins signature. | 82 | 113 | IPR006671 | - | |
Bda11g01253 | 339 | SMART | Cyclin_C_2 | 184 | 317 | IPR004367 | - | |
Bda11g01253 | 339 | Pfam | Cyclin, C-terminal domain | 184 | 284 | IPR004367 | - | |
Bda11g01253 | 339 | PANTHER | CYCLINS | 13 | 316 | IPR039361 | - | |
Bda11g01253 | 339 | SMART | cyclin_7 | 87 | 175 | IPR013763 | - | |
Bda11g01253 | 339 | Gene3D | - | 65 | 182 | - | - | |
Bda11g01253 | 339 | SUPERFAMILY | Cyclin-like | 165 | 286 | IPR036915 | - | |
Bda11g01253 | 339 | MobiDBLite | consensus disorder prediction | 302 | 339 | - | - | |
Bda11g01253 | 339 | CDD | CYCLIN | 81 | 174 | IPR013763 | - | |
Bda11g01253 | 339 | SUPERFAMILY | Cyclin-like | 47 | 181 | IPR036915 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda08g00683 | Bda-Chr8:7267972 | Bda11g01253 | Bda-Chr11:13122638 | 1.18E-55 | dispersed | |
Bda11g01253 | Bda-Chr11:13122638 | Bda13g01369 | Bda-Chr13:36271879 | 1.04E-53 | dispersed | |
Bda07g01568 | Bda-Chr7:29111521 | Bda11g01253 | Bda-Chr11:13122638 | 1.60E-128 | transposed | |
Bda01g02234 | Bda-Chr1:58166437 | Bda11g01253 | Bda-Chr11:13122638 | 1.09E-165 | wgd | |
Bda11g01253 | Bda-Chr11:13122638 | Bda07g01437 | Bda-Chr7:26542392 | 9.50E-40 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01253 | K18810 | - | tcc:18609384 | 401.749 |