Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01261 ATGGCAGCCCGGAGGTTCTCCCAGCTTCTCTCTCGCTCCTTTGCTTCTCCTTCCTCTTTCTTCACCGGAGGTAGAAGTCATTATGCACGTGGAACAGCAGGAAGATACAGCACGGCGGCGGCCATTGAAGAGCCTATTAAACCTTCTGTCAACGTCAATTACACTCGGCTTCTGATCAACGGCCAGTTTGTCGATTCTGCTTCCGGTAGGAAAACTTTTCCGACGTTGGACCCGAGGACCGGTGATGTCATCGCCCATGTTGCAGAGGGAGACGCCGAAGACATTGATCGAGCTGTGTCGGCCGCTCGCCGAGCATTTGACGAGGGTCCATGGCCGAAGATGACTGCTTATGAACGATCTCGGATTATTCTGCGGTTCGCCGATTTACTTGAGAAGCACAACGATGAAATTGCAGCTCTTGAAACTTGGGATAATGGGAAGACATATGAACAATCTGCTGAAGTCGAAGTTCCAATGTTTGTACGTCTGTTCCGGTACTATGGAGGTTGGGCGGATAAGATTCACGGCCTTACAGTTCCGGCCGACGGCCCTCACCATGTTCAAATCTTGCACGAACCGATCGGCGTTGTGGGTCAGATTATCCCGTGGAATTTTCCTCTTCTCATGTACGCGTGGAAGGTCGGGCCGGCGTTGGCCTGCGGAAACACCATTGTTCTGAAAACAGCAGAGCAGACTCCATTATCGGCTCTGTTCGTCACTAAGTTATTGCATGAGGCCGGACTTCCTGACGGCGTGCTTAATATTGTTTCTGGGTTTGGGGCGACGGCCGGAGCTGCTTTAGCCAGTCATATGGATGTAGACAAGCTTGCATTCACTGGATCGACTGAAACTGGCAAAGTCGTACTTGGATTGTCGGCGAAAAGCAATCTTAAGCCAGTAACTTTAGAACTTGGTGGGAAATCCCCTTTCATCGTATGTGAGGATGCTGATGTGGACGAAGCTGTTGAGCTGGCTCATTTCGCTCTATTTTTTAATCAAGGACAATGCTGTTGTGCCGGTTCTCGTACTTTTGTACACGAAAGCGTGTATGACGAGTTTTTGGCGAAAGCGAAGGAGCGGGCTAGGACACGAGCAGTTGGCGATCCGTTCAAGGGTGGTATTGAACAAGGACCTCAGATTGATTCAAAGCAATTTGACAAGATTCTCAAGTACATAAAATCTGGAGTTGAAAGTGGAGCTACTCTTGAAGCTGGAGGAGAGAGGCTTGGCTCAAAGGGCTATTATATCAAGCCTACTGTTTTCTCAAATGTTCAGGATGACATGTTGATAGCAAAAGATGAGATCTTTGGTCCAGTTCAAACGATTTTGAAGTTCAAAAAGCTTGATGAGGTTATCAAGAGAGCAAACGCCAGTCAATACGGGCTGGCAGCTGGAATATTCACGAAGAACATTGACACGGCCAACACGTTAACCCGAGCTTTGAGAGTAGGATCGGTGTTTATAAATTGTTTCGATATATTTGATGCTGCCATTCCATTTGGTGGGTATAAGATGAGTGGCCATGGAAGGGAAAAAGGAATATACAGCCTTAATAATTATCTGCAAGTCAAGGCTGTGGTCACTCTCTTGAAGAATCCTGCTTGGCTTTAA 1611 47.73 MAARRFSQLLSRSFASPSSFFTGGRSHYARGTAGRYSTAAAIEEPIKPSVNVNYTRLLINGQFVDSASGRKTFPTLDPRTGDVIAHVAEGDAEDIDRAVSAARRAFDEGPWPKMTAYERSRIILRFADLLEKHNDEIAALETWDNGKTYEQSAEVEVPMFVRLFRYYGGWADKIHGLTVPADGPHHVQILHEPIGVVGQIIPWNFPLLMYAWKVGPALACGNTIVLKTAEQTPLSALFVTKLLHEAGLPDGVLNIVSGFGATAGAALASHMDVDKLAFTGSTETGKVVLGLSAKSNLKPVTLELGGKSPFIVCEDADVDEAVELAHFALFFNQGQCCCAGSRTFVHESVYDEFLAKAKERARTRAVGDPFKGGIEQGPQIDSKQFDKILKYIKSGVESGATLEAGGERLGSKGYYIKPTVFSNVQDDMLIAKDEIFGPVQTILKFKKLDEVIKRANASQYGLAAGIFTKNIDTANTLTRALRVGSVFINCFDIFDAAIPFGGYKMSGHGREKGIYSLNNYLQVKAVVTLLKNPAWL 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13221454 13224995 + Bda007776.1 Bda11g01261 16369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01261 536 Pfam Aldehyde dehydrogenase family 64 526 IPR015590 GO:0016491
Bda11g01261 536 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 24 536 - -
Bda11g01261 536 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 302 309 IPR029510 GO:0016491
Bda11g01261 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 70 526 IPR016162 GO:0016491
Bda11g01261 536 CDD ALDH_F2BC 52 528 - -
Bda11g01261 536 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 24 536 - -
Bda11g01261 536 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 330 341 IPR016160 GO:0016491
Bda11g01261 536 SUPERFAMILY ALDH-like 52 527 IPR016161 GO:0016491
Bda11g01261 536 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 308 497 IPR016163 GO:0016620
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda01g01881 Bda-Chr1:54992407 Bda11g01261 Bda-Chr11:13221454 0 dispersed
Bda06g00234 Bda-Chr6:4124204 Bda11g01261 Bda-Chr11:13221454 1.24E-106 dispersed
Bda11g00121 Bda-Chr11:1644231 Bda11g01261 Bda-Chr11:13221454 0 dispersed
Bda11g01261 Bda-Chr11:13221454 Bda13g00727 Bda-Chr13:8750328 2.28E-90 dispersed
Bda13g00775 Bda-Chr13:9260330 Bda11g01261 Bda-Chr11:13221454 2.40E-44 transposed
Bda01g02225 Bda-Chr1:58076734 Bda11g01261 Bda-Chr11:13221454 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01261 K00128 - zju:107428629 900.968