Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01277 ATGAAATTAAAAGTGGTTTTTCTGGGTTTACTGGTTTTGTCACTGATGGAGCTGTCTTCTCCGACGCTGTCTCCTTCTGGTATAAACTATGAAGTTGTGGCATTGATGGCCATTAAAAATGATCTGACTGATCCACATAATGTTCTGCAAAATTGGGACATTAACTCTGTGGATCCTTGTGGATGGAGGATGGTTACTTGCTCCCCTGATGGATATGTCTCAGCTTTAGGGCTACCCAGTCAGAGCTTGTCTGGAACCTTATCTCCTGGAATTGGAAATCTCAGTAATCTGCACTCAGTGGACTTGTCTTTCAACAATCTCAGTGGTCCCTTGCCGAAAATATCAGCAAGAACTTTAAAAATTACAGGTAACCCTTTAATTTGTGGTCCAAACAACTGTCCGGGAGTGTATCCCGAGCCATCGTCATTAGCTCCGGATTCTCTGAAAGGGGAGTTAGAATCCCAAACAAAAAATCACCATGTTGCTGTTGCTTTCGGGGCTAGTTTCAGTTCTGCCTTTTTCTTTATAGCTCTTGTGGGACTTTTTGTTTGGTGGCGATACAGACATAACAAGCAAATTTTCTTTGATGTTAATGATCAACATGATCCGGAGGTATGCTTAGGCCATCTGAGAATGTACTCGTTTAAGGAGCTCCGGGCAGCCACTGATCATTTCAATTCGAAGAATATTTTGGGAAGAGGGGGATTTGGAATTGTGTACAAGGGAAGCTTGAATGATGGAACTCTGGTTGCCGTTAAACGGCTGAAAGACTACAACGCCGCCGGCGGGGAAATCCAGTTTCGGACTGAAGTGGAGACGATAAGTTTGGCTGTTCATAGAAATCTTCTCAGGTTATGTGGATTTTGTTCGAATGAAAACGAGCGCCTTCTTGTTTATCCGTACATGCCCAATGGAAGTGTTGCCTCTCAATTGAGAGATCGCGTTAATGGTTGTCCGGCTCTAGACTGGGGAAGACGGAAGAGGATAGCTTTAGGCACGGCTAGAGGGTTGGCATATTTACACGAGCAATGTGACCCGAAAATTATTCACCGTGACGTAAAAGCGGCTAACATATTACTTGATGAAGATTTCGAGGCTTTAGTTGGAGATTTTGGGCTGGCGAAGCTTTTAGACCATAGAGATTCTCACGTCACAACGACGGTTCGTGGAACTATTGGACACATTGCCCCCGAGTACCTATCAACTGGTCGATCGTCGGAAAAGACTGATGTCTTTGGCTTCGGGATATTACTTCTCGAGCTTGTGAAAAAGCTGGATGAAGAGGGAAAGCTAAGTCTAATTGTGGACAAGGATCTCAAGGACTACAATTGTTCGGTCGACTTTGTTAGCTCTCCGTTTCTTGTTCGCGAGTCATCCTTTAATGGCAAAAATGGATTGTTTGAGACGTTAAGATTGGATTTGATGGATCGAACTACTTCAATGTATAACGATGCTGATGTACTAATCTTCAACACGGGCCATTGGTGGACTCATGAGAAAACTTCTCGAGGGCGAGCTACTTCGGTTTTTTTTAATGATATTTCCAAGATTAAAGATTATTACCAAGAAGGTGAATACGTTCATCCGAGGCTAAAGGTCCTCGAAGCGTATAAGAGGGCTCTTACTACTTGGAGCCATTGGATCGACGAAAACATCAATCCCAATCGAACAATAATTTTCTTCCGAGGGTATTCCCTTACCCATTTTAGAGGTGGGCTATGGAACTCAGGAGGACAGTGCCATAAAGAGGCAGATCCAATCTTCAATGAAAGTCAAGTTTTTAAGTATCCCACCAAAATGAGGGCTCTAGAGTCTGTGTTGAAGGAGATGAAAACTCCAGTAATATATTTGAACATTAGTAGACAAACAGGGTACAGAAAAGATGGGCATCCTTCAATTTACAGAATGGAGTATCAGACGGAAGAAGAAAAGATTGCGGCCGAGCAATCGCAAGATTGCAGCCATTGGTGTTTGCCTGGAGTGCCTGATACGTGGAATGAGCTGTTGTTTGCGTCTCTGTTGAAGGTCAGACATGGCCGATTATGGGGGAACTAA 2055 43.55 MKLKVVFLGLLVLSLMELSSPTLSPSGINYEVVALMAIKNDLTDPHNVLQNWDINSVDPCGWRMVTCSPDGYVSALGLPSQSLSGTLSPGIGNLSNLHSVDLSFNNLSGPLPKISARTLKITGNPLICGPNNCPGVYPEPSSLAPDSLKGELESQTKNHHVAVAFGASFSSAFFFIALVGLFVWWRYRHNKQIFFDVNDQHDPEVCLGHLRMYSFKELRAATDHFNSKNILGRGGFGIVYKGSLNDGTLVAVKRLKDYNAAGGEIQFRTEVETISLAVHRNLLRLCGFCSNENERLLVYPYMPNGSVASQLRDRVNGCPALDWGRRKRIALGTARGLAYLHEQCDPKIIHRDVKAANILLDEDFEALVGDFGLAKLLDHRDSHVTTTVRGTIGHIAPEYLSTGRSSEKTDVFGFGILLLELVKKLDEEGKLSLIVDKDLKDYNCSVDFVSSPFLVRESSFNGKNGLFETLRLDLMDRTTSMYNDADVLIFNTGHWWTHEKTSRGRATSVFFNDISKIKDYYQEGEYVHPRLKVLEAYKRALTTWSHWIDENINPNRTIIFFRGYSLTHFRGGLWNSGGQCHKEADPIFNESQVFKYPTKMRALESVLKEMKTPVIYLNISRQTGYRKDGHPSIYRMEYQTEEEKIAAEQSQDCSHWCLPGVPDTWNELLFASLLKVRHGRLWGN 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 13373417 13381032 + Bda007795.2 Bda11g01277 16385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01277 684 Gene3D Phosphorylase Kinase; domain 1 194 301 - -
Bda11g01277 684 Gene3D Ribonuclease Inhibitor 27 135 IPR032675 -
Bda11g01277 684 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 439 671 IPR026057 GO:0016740
Bda11g01277 684 SUPERFAMILY L domain-like 29 126 - -
Bda11g01277 684 SUPERFAMILY Protein kinase-like (PK-like) 202 422 IPR011009 -
Bda11g01277 684 ProSitePatterns Serine/Threonine protein kinases active-site signature. 348 360 IPR008271 GO:0004672|GO:0006468
Bda11g01277 684 ProSitePatterns Protein kinases ATP-binding region signature. 231 253 IPR017441 GO:0005524
Bda11g01277 684 ProSiteProfiles Protein kinase domain profile. 225 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01277 684 Pfam Protein kinase domain 226 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01277 684 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 100 422 - -
Bda11g01277 684 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 5 102 - -
Bda11g01277 684 PANTHER PROTEIN NSP-INTERACTING KINASE 3 100 422 - -
Bda11g01277 684 PANTHER PROTEIN NSP-INTERACTING KINASE 3 5 102 - -
Bda11g01277 684 Gene3D Transferase(Phosphotransferase) domain 1 302 451 - -
Bda11g01277 684 SMART serkin_6 225 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01277 684 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01277 Bda-Chr11:13373417 Bda13g00252 Bda-Chr13:3193202 2.73E-121 dispersed
Bda01g02214 Bda-Chr1:57998963 Bda11g01277 Bda-Chr11:13373417 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69928 PF13839 PC-Esterase 3.50E-63 CL0264 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01277 - - mnt:21410346 612.453