Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01305 | TATAAGGCATTCGATGAAGTCGATGGCATTGAAGTTGCTTGGAACCAAGTGAGAATTGATGTTGTTTTACAGTCACCTGAAGATTTGGAAAAATTGTATTCTGAAGTGCACTTGCTAAAATCGGTGAAACATGAGAATGTCATTAAGTTCTTTAGTTCTTGGGTGGATGATAAGAAGAAAACTGTCAATATGATTACTGAGCTCTTCACATCGGGGAGTCTACGCCAATATCGGAAGAAGCATAAGAACGTTGACATGAAAGCAATAAAGAATTGGGCAAGGCAAATTCTTAAGGGTTTGGTCTACCTTCATAGTCATACTCCTCCAATTATTCACAGAGACTTGAAATGCGACAATATTTTCGTAAATGGGAACCACGGAGAAGTAAAAATTGGAGATCTCGGATTGGCGATTGTCATGCAACAGCCCACAGCTCGGAGTGTCATTGGAACGCCTGAATTTATGGCTCCTGAACTTTATGAGGAGGAATATAACGAACTTGTGGATATATATTCTTTCGGAATGTGTATGCTGGAGATGGTAACTTTCGATTATCCATACAGCGAATGCAAAAATCCAGCTCAAATTTATAAGAAGGTTACCTCTGGAATTAAACCTGCTTCCCTTTATAATGTTTCTGATCCCGAAATTAAGGAGTTCATTGAGAAATGTCTGGTTCCAGCACAGGAGAGATTATCTGCAACAGAGCTTCTCGAAGATCCATTCCTTCGGATTGAGAACCCAAAGGAGCCAATACGCGATCCTTTACAGTTACCAAACCATAGTCTCAATGCATTAAATGTACCAAAGTCTGGGCCGCTTTCAATGGACATAGATATTGATGATAGGCAACTTTCTTTAAGCGCTTGTACAGGAAGCAACAATGGCAGCCCATATTGTCCAGCATTGGAATTTTATAGAATGCATAACAACAATGAATTTAGACTGAGAGGGAAGAAAAATGATGAGAATTCAGTTTCATTGAACTTGCGCATCGCGGACTTACGAGGTCGAGTGAGGAATATACATTTTCTGTTTTACCTTGATTCTGATACTGCACATTCTGTGGCTGCTGAGATGGTGGAGCATTTGGAACTAGCAGACCATGATGTAGCTTTCATTGCTGAGTTTATTGATTACTTGATCATGAAACTTATACCTTATTGGAAGCCTTTATCTGGTTATTTCGCAAATAGGGAAACAAGTTCTTGTGGTGGATCTCCTCTCCATAACAATGGAAAATCCTCTACTGCCTGTCTATGGGATTCGATGTTGACTGGCATTCCTTCAGAGCTCGTCGATGAGCAAGATTCGTTCTCTGGATTGATAAATCCCGACAAAAATTCTATGCAGGATGAGGATGTTAGCTGGTCCAACAACCCTACTGGCTCCATTTTTAAAGCTGACTGCAGTCCTCCAGTTCTCGATAATTTTGAAGATCAACATTCACATGCATCTACTGGTTCTGAGATTATTGTTGAAGACTACTCTACCAAAAACGATAAAGCGGAGGAATTTGATTCAAATCTTGAAGGAAATTCAAAAGGGTCTAGTTGGTATGCATCGGAACTGGGGCTCGGAGATTCGTTCTTCGATGACTGCAAATCAGAGAGAAATGCGAACGACACGGGGGTATCGTCCCCGACAAATGAATTTGCAAAGAATTTGGAATTGTCATTTCACGACATTTGTAGAACTTCAAACATGATGAGCTTGACGAGTAGTTGTTCCTCGTTATCCATAGCTGACAAAGATGTGGATGGTGATCTGAAGTTGGAGCTTGAAGCCATAGAGGCGCAGTACCAGCAATGGTTTCAAGAACTCGGTAGAATGAAGGAAGAAGCATTGGAAGCGACGAGGAAGAGATGGACGGCGAAGAAGAAACTCACTGTTCAATGA | 1899 | 40.92 | YKAFDEVDGIEVAWNQVRIDVVLQSPEDLEKLYSEVHLLKSVKHENVIKFFSSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILKGLVYLHSHTPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTFDYPYSECKNPAQIYKKVTSGIKPASLYNVSDPEIKEFIEKCLVPAQERLSATELLEDPFLRIENPKEPIRDPLQLPNHSLNALNVPKSGPLSMDIDIDDRQLSLSACTGSNNGSPYCPALEFYRMHNNNEFRLRGKKNDENSVSLNLRIADLRGRVRNIHFLFYLDSDTAHSVAAEMVEHLELADHDVAFIAEFIDYLIMKLIPYWKPLSGYFANRETSSCGGSPLHNNGKSSTACLWDSMLTGIPSELVDEQDSFSGLINPDKNSMQDEDVSWSNNPTGSIFKADCSPPVLDNFEDQHSHASTGSEIIVEDYSTKNDKAEEFDSNLEGNSKGSSWYASELGLGDSFFDDCKSERNANDTGVSSPTNEFAKNLELSFHDICRTSNMMSLTSSCSSLSIADKDVDGDLKLELEAIEAQYQQWFQELGRMKEEALEATRKRWTAKKKLTVQ | 632 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 14078103 | 14080706 | + | Bda007824.18 | Bda11g01305 | 16413 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01305 | 632 | Coils | Coil | 594 | 614 | - | - | |
Bda11g01305 | 632 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 67 | - | - | |
Bda11g01305 | 632 | PANTHER | KINASE DOMAIN PROTEIN | 1 | 632 | - | - | |
Bda11g01305 | 632 | SMART | serkin_6 | 1 | 243 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01305 | 632 | SUPERFAMILY | Protein kinase-like (PK-like) | 1 | 244 | IPR011009 | - | |
Bda11g01305 | 632 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 1 | 632 | - | - | |
Bda11g01305 | 632 | Gene3D | - | 324 | 388 | - | - | |
Bda11g01305 | 632 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 110 | 122 | IPR008271 | GO:0004672|GO:0006468 | |
Bda11g01305 | 632 | Pfam | Protein kinase domain | 1 | 243 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01305 | 632 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 327 | 381 | IPR024678 | GO:0004674|GO:0005524 | |
Bda11g01305 | 632 | ProSiteProfiles | Protein kinase domain profile. | 1 | 243 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bda11g01305 | 632 | CDD | STKc_WNK | 1 | 243 | - | - | |
Bda11g01305 | 632 | Gene3D | Transferase(Phosphotransferase) domain 1 | 69 | 247 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda10g00352 | Bda-Chr10:34257425 | Bda11g01305 | Bda-Chr11:14078103 | 1.10E-177 | dispersed | |
Bda11g01305 | Bda-Chr11:14078103 | Bda13g00394 | Bda-Chr13:4937672 | 8.76E-45 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
69929 | PF00069 | Pkinase | 3.60E-48 | CL0016 | Bda | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01305 | K08867 | - | jre:108986606 | 884.789 |