Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01305 TATAAGGCATTCGATGAAGTCGATGGCATTGAAGTTGCTTGGAACCAAGTGAGAATTGATGTTGTTTTACAGTCACCTGAAGATTTGGAAAAATTGTATTCTGAAGTGCACTTGCTAAAATCGGTGAAACATGAGAATGTCATTAAGTTCTTTAGTTCTTGGGTGGATGATAAGAAGAAAACTGTCAATATGATTACTGAGCTCTTCACATCGGGGAGTCTACGCCAATATCGGAAGAAGCATAAGAACGTTGACATGAAAGCAATAAAGAATTGGGCAAGGCAAATTCTTAAGGGTTTGGTCTACCTTCATAGTCATACTCCTCCAATTATTCACAGAGACTTGAAATGCGACAATATTTTCGTAAATGGGAACCACGGAGAAGTAAAAATTGGAGATCTCGGATTGGCGATTGTCATGCAACAGCCCACAGCTCGGAGTGTCATTGGAACGCCTGAATTTATGGCTCCTGAACTTTATGAGGAGGAATATAACGAACTTGTGGATATATATTCTTTCGGAATGTGTATGCTGGAGATGGTAACTTTCGATTATCCATACAGCGAATGCAAAAATCCAGCTCAAATTTATAAGAAGGTTACCTCTGGAATTAAACCTGCTTCCCTTTATAATGTTTCTGATCCCGAAATTAAGGAGTTCATTGAGAAATGTCTGGTTCCAGCACAGGAGAGATTATCTGCAACAGAGCTTCTCGAAGATCCATTCCTTCGGATTGAGAACCCAAAGGAGCCAATACGCGATCCTTTACAGTTACCAAACCATAGTCTCAATGCATTAAATGTACCAAAGTCTGGGCCGCTTTCAATGGACATAGATATTGATGATAGGCAACTTTCTTTAAGCGCTTGTACAGGAAGCAACAATGGCAGCCCATATTGTCCAGCATTGGAATTTTATAGAATGCATAACAACAATGAATTTAGACTGAGAGGGAAGAAAAATGATGAGAATTCAGTTTCATTGAACTTGCGCATCGCGGACTTACGAGGTCGAGTGAGGAATATACATTTTCTGTTTTACCTTGATTCTGATACTGCACATTCTGTGGCTGCTGAGATGGTGGAGCATTTGGAACTAGCAGACCATGATGTAGCTTTCATTGCTGAGTTTATTGATTACTTGATCATGAAACTTATACCTTATTGGAAGCCTTTATCTGGTTATTTCGCAAATAGGGAAACAAGTTCTTGTGGTGGATCTCCTCTCCATAACAATGGAAAATCCTCTACTGCCTGTCTATGGGATTCGATGTTGACTGGCATTCCTTCAGAGCTCGTCGATGAGCAAGATTCGTTCTCTGGATTGATAAATCCCGACAAAAATTCTATGCAGGATGAGGATGTTAGCTGGTCCAACAACCCTACTGGCTCCATTTTTAAAGCTGACTGCAGTCCTCCAGTTCTCGATAATTTTGAAGATCAACATTCACATGCATCTACTGGTTCTGAGATTATTGTTGAAGACTACTCTACCAAAAACGATAAAGCGGAGGAATTTGATTCAAATCTTGAAGGAAATTCAAAAGGGTCTAGTTGGTATGCATCGGAACTGGGGCTCGGAGATTCGTTCTTCGATGACTGCAAATCAGAGAGAAATGCGAACGACACGGGGGTATCGTCCCCGACAAATGAATTTGCAAAGAATTTGGAATTGTCATTTCACGACATTTGTAGAACTTCAAACATGATGAGCTTGACGAGTAGTTGTTCCTCGTTATCCATAGCTGACAAAGATGTGGATGGTGATCTGAAGTTGGAGCTTGAAGCCATAGAGGCGCAGTACCAGCAATGGTTTCAAGAACTCGGTAGAATGAAGGAAGAAGCATTGGAAGCGACGAGGAAGAGATGGACGGCGAAGAAGAAACTCACTGTTCAATGA 1899 40.92 YKAFDEVDGIEVAWNQVRIDVVLQSPEDLEKLYSEVHLLKSVKHENVIKFFSSWVDDKKKTVNMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILKGLVYLHSHTPPIIHRDLKCDNIFVNGNHGEVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMVTFDYPYSECKNPAQIYKKVTSGIKPASLYNVSDPEIKEFIEKCLVPAQERLSATELLEDPFLRIENPKEPIRDPLQLPNHSLNALNVPKSGPLSMDIDIDDRQLSLSACTGSNNGSPYCPALEFYRMHNNNEFRLRGKKNDENSVSLNLRIADLRGRVRNIHFLFYLDSDTAHSVAAEMVEHLELADHDVAFIAEFIDYLIMKLIPYWKPLSGYFANRETSSCGGSPLHNNGKSSTACLWDSMLTGIPSELVDEQDSFSGLINPDKNSMQDEDVSWSNNPTGSIFKADCSPPVLDNFEDQHSHASTGSEIIVEDYSTKNDKAEEFDSNLEGNSKGSSWYASELGLGDSFFDDCKSERNANDTGVSSPTNEFAKNLELSFHDICRTSNMMSLTSSCSSLSIADKDVDGDLKLELEAIEAQYQQWFQELGRMKEEALEATRKRWTAKKKLTVQ 632
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 14078103 14080706 + Bda007824.18 Bda11g01305 16413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01305 632 Coils Coil 594 614 - -
Bda11g01305 632 Gene3D Phosphorylase Kinase; domain 1 1 67 - -
Bda11g01305 632 PANTHER KINASE DOMAIN PROTEIN 1 632 - -
Bda11g01305 632 SMART serkin_6 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01305 632 SUPERFAMILY Protein kinase-like (PK-like) 1 244 IPR011009 -
Bda11g01305 632 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 632 - -
Bda11g01305 632 Gene3D - 324 388 - -
Bda11g01305 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 110 122 IPR008271 GO:0004672|GO:0006468
Bda11g01305 632 Pfam Protein kinase domain 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01305 632 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 327 381 IPR024678 GO:0004674|GO:0005524
Bda11g01305 632 ProSiteProfiles Protein kinase domain profile. 1 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01305 632 CDD STKc_WNK 1 243 - -
Bda11g01305 632 Gene3D Transferase(Phosphotransferase) domain 1 69 247 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00352 Bda-Chr10:34257425 Bda11g01305 Bda-Chr11:14078103 1.10E-177 dispersed
Bda11g01305 Bda-Chr11:14078103 Bda13g00394 Bda-Chr13:4937672 8.76E-45 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69929 PF00069 Pkinase 3.60E-48 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01305 K08867 - jre:108986606 884.789