Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01345 ATGGCGTCCATGACCAACCATGGCTTGTTTGAGACACAGGATGCAACTACTCAAATGGGTTTCCTTTCTTTTCCTCCAAACACCGCGTTTTCTGCGGTGGGTTTTCATCAGTCCAACATGTCTTCTTCTGGAACCCTAGTTTCATCGGCCACACCTGATCTGATCAAGCACAGAAACGAAGAAAACGCTTTTGGGTTTGAAGGAATAGAGCTCCTTTCATCACAAAAATCAACCGCTAATCATCACTGGGCATTTGGAGAAATGGGTGGGAGTTTAAATGGAAGAAGAAATGGAGGAGATGATCATAATCTAGGTGTAAATCCGATGAAGATGAAGAAGATAAAGGCGAGGAGGCAGGTGAGAGAGCCTAGGTTTTGTTTCAAAACCATGAGCGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGACAAAAAGTGGTAAAAAACACTCAACGTCCTAGGAGCTACTACCGTTGCACACAAGATAACTGCCGTGTAAAAAAACGAGTGGAGCGATTAGCCGAAGACCCGAGGATGGTAATCACGACGTACGAAGGGCGACATGGCCATTCACCTTCTAATGAACTGGAAGAATCCCAAGCTTCATCCCATACGTACAATGTCTTCTGGTAG 642 44.86 MASMTNHGLFETQDATTQMGFLSFPPNTAFSAVGFHQSNMSSSGTLVSSATPDLIKHRNEENAFGFEGIELLSSQKSTANHHWAFGEMGGSLNGRRNGGDDHNLGVNPMKMKKIKARRQVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQRPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHGHSPSNELEESQASSHTYNVFW 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15001434 15003099 + Bda007875.1 Bda11g01345 16453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01345 213 MobiDBLite consensus disorder prediction 187 213 - -
Bda11g01345 213 SUPERFAMILY WRKY DNA-binding domain 128 195 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g01345 213 SMART WRKY_cls 136 195 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01345 213 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 35 205 IPR044810 GO:0003700
Bda11g01345 213 MobiDBLite consensus disorder prediction 198 213 - -
Bda11g01345 213 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 35 205 - -
Bda11g01345 213 Pfam WRKY DNA -binding domain 137 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01345 213 Gene3D WRKY domain 123 189 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g01345 213 ProSiteProfiles WRKY domain profile. 131 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda08g00075 Bda-Chr8:701243 Bda11g01345 Bda-Chr11:15001434 6.71E-49 dispersed
Bda11g01345 Bda-Chr11:15001434 Bda11g01358 Bda-Chr11:15805064 2.74E-90 dispersed
Bda11g01345 Bda-Chr11:15001434 Bda13g00224 Bda-Chr13:2849666 1.48E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16685 PF03106 WRKY 2.90E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01345 - - tcc:18611706 266.159