Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01352 ATGGCTAAATCGTCGGAGCAAGAACACCCACAAAAGGCTTTTGGTTGGGCTGCCACCGATTCTTCTGGTTTTCTCTCTCCCTTTCATTTTTCCAGAAGGTTCCTGGAGAATGGAGAGGACGACGTCACTGTGAAGGTTCTTTATTGTGGGGTTTGCCATTCTGATCTACACTTTGTTAAGAATGAGTGGGGCATCTCAGATTATCCTATTGTTCCTGGGCATGAAATTACGGGTATCATAATGAATCTCGGAAGCAACGTGAAGAAATTCAAAGTGGGTGATCGAGTTGGAGTTGGCGTGGTAATAGGGTCTTGTAGGAGCTGTGAAAAATGCGATGAGGACTTGGAAAACTACTGCCCGGAAGTGATTTTTACATATAACTCCCACTATTATGATGGATCGAAAAACTATGGGGGTTATTCTGATATAATTGTGGTGGATCAGCATTTTGTGCTTCAATTTCCTGACAATCTACCTCTTGATGGGGGGGCTCCTCTGCTTTGTGCTGGAATTTCAGTGTACAGCCCAATGAAATACTATGGATTGACAGAGGCAGGCAAGCATTTGGGTGTGGTTGGGCTTGGTGGACTTGGCCATGTTGCTGTCAAACTTGGGAAGGCATTTGGGTTGAAAGTTACAGTCGTTAGTACCTCCCCCTCTAAGGAAGATGATGCCATTAACAAAATTGGAGCTGATTCCTTTCTTCTCTCCACTGACCCTCTCAAAATCAAGGCAAGCTGGTTTCTTTCTGCTGCTCTGGGTAGCATGGATTTTATAATTGACACAGTGGCTGCTGTTCATTCCCTTGCTCCTCTGCTTGGTTTGTTGAAGATAAATGGAAAGATCATAACTGTGGGTATGCCCATCCAGCCTCTTGAGCTCCCAATCATTCCCCTTGTTTTGGGAAGGAAGATGGTGGGGGGAAGCGACATCGGAGGAGTAAAAGAGACGCAAGAAATGCTAAACTTCTGTGCAAAACATAGTATCTCACCAGATATTGAATTGATTCAGATCGATGAAATCAACACGGCATTCGAAAGGCTAGCCAAATCAGACGTCAGGTTTCGGTTTGTCATCGATGTGGCAAACTCGTTAAAAACT 1101 44.5 MAKSSEQEHPQKAFGWAATDSSGFLSPFHFSRRFLENGEDDVTVKVLYCGVCHSDLHFVKNEWGISDYPIVPGHEITGIIMNLGSNVKKFKVGDRVGVGVVIGSCRSCEKCDEDLENYCPEVIFTYNSHYYDGSKNYGGYSDIIVVDQHFVLQFPDNLPLDGGAPLLCAGISVYSPMKYYGLTEAGKHLGVVGLGGLGHVAVKLGKAFGLKVTVVSTSPSKEDDAINKIGADSFLLSTDPLKIKASWFLSAALGSMDFIIDTVAAVHSLAPLLGLLKINGKIITVGMPIQPLELPIIPLVLGRKMVGGSDIGGVKETQEMLNFCAKHSISPDIELIQIDEINTAFERLAKSDVRFRFVIDVANSLKT 367
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15391744 15407679 - Bda033151 Bda11g01352 16460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01352 367 CDD CAD1 14 360 - -
Bda11g01352 367 SMART PKS_ER_names_mod 23 359 IPR020843 GO:0016491
Bda11g01352 367 Pfam Zinc-binding dehydrogenase 196 325 IPR013149 -
Bda11g01352 367 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
Bda11g01352 367 PANTHER ALDEHYDE REDUCTASE 11 365 - -
Bda11g01352 367 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 2-RELATED 11 365 - -
Bda11g01352 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 329 IPR036291 -
Bda11g01352 367 Gene3D - 169 331 - -
Bda11g01352 367 Gene3D - 16 361 - -
Bda11g01352 367 SUPERFAMILY GroES-like 9 201 IPR011032 -
Bda11g01352 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bda11g01352 Bda14g01063 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01352 Bda-Chr11:15391744 Bda14g01068 Bda-Chr14:9251372 0 dispersed
Bda11g01352 Bda-Chr11:15391744 Bda14g01063 Bda-Chr14:9141946 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01352 K00083 - vvi:100245522 547.74