Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01358 ATGGGTGGGTGTTTAAATGGAAGAAGAAATGGAGGAGATGATCATAATCTAGGTGTGAATCCGATGAAGATGAAGAAGATAAAGGCGAGGAGGCAGGTGAGAGAGCCTAGGTTTTGTTTCAAAACCATGAGCGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGACAAAAAGTTGTAAAAAACACTCAACGTCCTAAGAGCTACTACCGTTGCACACAAGATAACTGCCGTGTAAAAAAACGAGTGGAGCGATTAGCCGAAGACCCGAGGATGGTAATCACGACGTACGAAGGGCGACATGGCCATTCACCTTCCAATGAACTGGAAGAATCCCAAGCTCCATCCCATATGAACAATGTCTTCTGGTAG 381 44.62 MGGCLNGRRNGGDDHNLGVNPMKMKKIKARRQVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQRPKSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHGHSPSNELEESQAPSHMNNVFW 126
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15805064 15806381 - Bda007895.1 Bda11g01358 16466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01358 126 Pfam WRKY DNA -binding domain 50 106 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01358 126 SMART WRKY_cls 49 108 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01358 126 PANTHER WRKY TRANSCRIPTION FACTOR 13-RELATED 16 120 - -
Bda11g01358 126 MobiDBLite consensus disorder prediction 1 20 - -
Bda11g01358 126 Gene3D WRKY domain 36 102 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bda11g01358 126 MobiDBLite consensus disorder prediction 100 126 - -
Bda11g01358 126 ProSiteProfiles WRKY domain profile. 44 109 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bda11g01358 126 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 16 120 IPR044810 GO:0003700
Bda11g01358 126 MobiDBLite consensus disorder prediction 111 126 - -
Bda11g01358 126 SUPERFAMILY WRKY DNA-binding domain 41 108 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01345 Bda-Chr11:15001434 Bda11g01358 Bda-Chr11:15805064 2.74E-90 dispersed
Bda11g01358 Bda-Chr11:15805064 Bda14g01185 Bda-Chr14:11728735 5.51E-67 dispersed
Bda11g01358 Bda-Chr11:15805064 Bda13g00224 Bda-Chr13:2849666 3.53E-32 transposed
Bda11g01358 Bda-Chr11:15805064 Bda05g00405 Bda-Chr5:49364112 2.20E-32 transposed
Bda11g01358 Bda-Chr11:15805064 Bda11g00494 Bda-Chr11:5270703 3.87E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16687 PF03106 WRKY 5.60E-24 CL0274 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01358 - - vvi:100247547 226.098