Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01358 | ATGGGTGGGTGTTTAAATGGAAGAAGAAATGGAGGAGATGATCATAATCTAGGTGTGAATCCGATGAAGATGAAGAAGATAAAGGCGAGGAGGCAGGTGAGAGAGCCTAGGTTTTGTTTCAAAACCATGAGCGATGTGGATGTGCTTGATGATGGTTACAAATGGAGGAAATACGGACAAAAAGTTGTAAAAAACACTCAACGTCCTAAGAGCTACTACCGTTGCACACAAGATAACTGCCGTGTAAAAAAACGAGTGGAGCGATTAGCCGAAGACCCGAGGATGGTAATCACGACGTACGAAGGGCGACATGGCCATTCACCTTCCAATGAACTGGAAGAATCCCAAGCTCCATCCCATATGAACAATGTCTTCTGGTAG | 381 | 44.62 | MGGCLNGRRNGGDDHNLGVNPMKMKKIKARRQVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQRPKSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHGHSPSNELEESQAPSHMNNVFW | 126 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 15805064 | 15806381 | - | Bda007895.1 | Bda11g01358 | 16466 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01358 | 126 | Pfam | WRKY DNA -binding domain | 50 | 106 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01358 | 126 | SMART | WRKY_cls | 49 | 108 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01358 | 126 | PANTHER | WRKY TRANSCRIPTION FACTOR 13-RELATED | 16 | 120 | - | - | |
Bda11g01358 | 126 | MobiDBLite | consensus disorder prediction | 1 | 20 | - | - | |
Bda11g01358 | 126 | Gene3D | WRKY domain | 36 | 102 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01358 | 126 | MobiDBLite | consensus disorder prediction | 100 | 126 | - | - | |
Bda11g01358 | 126 | ProSiteProfiles | WRKY domain profile. | 44 | 109 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bda11g01358 | 126 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 16 | 120 | IPR044810 | GO:0003700 | |
Bda11g01358 | 126 | MobiDBLite | consensus disorder prediction | 111 | 126 | - | - | |
Bda11g01358 | 126 | SUPERFAMILY | WRKY DNA-binding domain | 41 | 108 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01345 | Bda-Chr11:15001434 | Bda11g01358 | Bda-Chr11:15805064 | 2.74E-90 | dispersed | |
Bda11g01358 | Bda-Chr11:15805064 | Bda14g01185 | Bda-Chr14:11728735 | 5.51E-67 | dispersed | |
Bda11g01358 | Bda-Chr11:15805064 | Bda13g00224 | Bda-Chr13:2849666 | 3.53E-32 | transposed | |
Bda11g01358 | Bda-Chr11:15805064 | Bda05g00405 | Bda-Chr5:49364112 | 2.20E-32 | transposed | |
Bda11g01358 | Bda-Chr11:15805064 | Bda11g00494 | Bda-Chr11:5270703 | 3.87E-32 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16687 | PF03106 | WRKY | 5.60E-24 | CL0274 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01358 | - | - | vvi:100247547 | 226.098 |