Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01386 ATGGATATTGTCGAGTCTACACTCGACCTTACAGTCCAGAATCCAGAGGTGGAGGAATTGTCTTCTTCTAATTTAACTTGGACCAAGTTTGGGAATGCAAAACACTACGATGAAGTAGCTCTGATTCCATATACGCGTGTAGATGAGTTTATTATCGGTGAATGCTCGAACGTTGAGTGCCCAACTAGATTTCATATCGAGAGGGGAAGAAAACGCTCAAAGGGTAGCTTGAAAGAGTTCAAGAGTGATGAATACTTGGAATACCGAATGTATTGGTGCTCTTTTGGTCCTGAAAATTATGGAGAGGGTGGAGGTATATTGCCTAGCAGAAGATATCGGCTCAATACACGAAATCGTGCTGCTAGACCTCAATCAATGCGAGGCTGCACATGCCATTTTGTGGTGAAGAGGCTGTATGCACGTCCTTGGCTTGCACTTCTCATCTACAATGAGAGGCGTCATGTTAATAATTCTGGCTTTGTCTGCCATGGTCCCCTTGATAGGGATGCAATTGGCCCTGGTGCTGGTAAAGTTCCTTATATCTGTAATGAGATTCAACAACAGACTATGTCTATGATTTATCTGGGTATTCCTGAAGCCAACATTGTAGAGAAGCATCTTGAGGGACTTCAGCGATATTGTGGTCCAAACGCAAAAGTCAATAGTCTTGCTTCTCAATATGTTCATAAACTTGGAATGATTATTAAGCGGTCGAGTCATGAGTTGGATTTGGACGATCAAGCTAGCATCAAAATGTGGGTTGAACGCAATAAGAAGTCCGTCTTTGTCTATCAGGATGCTTCGGAATCAGATTCTTTCATTCTTGGAATCCAAACAGAGTGGCAATTGCAACAAATGATTCGATTTGGCGAGGGTAGTCTTATTGCTGCTGATTCGACATTTGGCATCAAGAGAATTAAGTACCCGCTTTGCACACTTCTAGTTTTTGACTCAAGACAACATGCACTCCCAGTGGCCTGGGTTATCACTCGTAGCTTTGCAAAGCCAGATGTTTCTAAGTGGATGAAAGCTCTTCTAACTCGAGCTCATATGGTGGATCCTGGTTGGAAGATCAGTGGATTTCTAATTGACGATGCAGCAACAGAGATTGATCCAATCATGCTTTTAGTACCTTTCTTATATCAAAATTCTGTCTCGAAACAACTTGAGATTAATTTTTGGTTATTGATATGGACTTTGGTCATCAGGGATGTATTTTGTTGCCCTATACTTTTTTCTTTGTGGCGCATCCGTAGATCATGGCTAAGGAATATTGTTAAGAGATGCAGTAACACTGAAATTCAGCGGGAAATGTTTAAACGACTTGGAGAAATTGTGTACAGCATTTGGAGAGAAGTTGATACCATGACTGTCTTGGAAGAATTCACTCATGATTTTGCAGATCAAACATTATTCATGGAATATTTTAAAGGCTCTTGGGTGCCAAAGATTGAAATGTGGCTTTCATCGATGAGGACTCTTCCGCTTGCAAGCCAGGAGTCATCTGGTGCTATCGAATCCTATCATCTGAAGCTAAAAGCAAAACTCTTCGATGATTCACATCTTGGAGCTCTGCAAAGAGTAGATTGGTTGGTCCACAAGCTAACTACCGAGTTGCATTCCAGTTATTGGCTGGATCGATATGCAGATGAAAGTGATTCTTTTCAAAATGTCAAGGAAGAATATATTGCTTCTACCTCCTGGCATCGTGCTCTTCAAATCCCAGATTCTGCAGTTTCATTGGATGATAAAGATCACCTTTTCGCAAAGGTTTTAAGCCAAAAAGACAGCAATCTAACTAACTTGGTATGGAATCCTGGCTCAGAATTTTCCTTTTGTGATTGTGCATGGTCAAAGGAAGGAAATCTTTGCAAGCACGTGATAAAGGTAAATATGATCTGTGAGACTCATCAAGGTTTCCAAGCTTCAATGTCCTTCCAATCATACAAGGAAATTTTAATGAATTTGTGTGAATTACCGCCAGATGATTCAGTTTCTTTAGATCTATCTATGGCATTGACCCACCAGATGCTTGATCATATTCAGAAACTTGTTGAGCTACATAGTTCAGAAAATATTAGTGCGGTTGTGAATAGACTACCATTGAAATGGGTTTCTAAGAAGGGAAGAACCTCCATTGGCAAGCCATCATCTACTATGTCTCTTGTAGGCAATTCTAAAGTTACTAAGAAAGCTCCCGCAAAAAAGCATAGAAAACGGAAGAGATTGTCAAGATTAAGGAAATCTCACCTTATCCACACTCTCACCACAATCTTTCATCACCTTCATAATCACTCCCTCTTTAAAACCCATGATCCCAAAAACACCACCATACCCTTCTCTCTCCACATTCCTACTCTCTCTCTCTCTCTAGAAACAACCTTCCCTCTAATGGCAACAGTCAGCTCAACCAATCTGTCCTGCAGCTATGCCCTTTCTGGAGCTGGACAATCCGAGCTCTCAAAGCTCAACTCTAAGCCGTCAATGGCTTCACTTGTCGGGTCAGGTCGGAAATTGCCATTGATCAGAGCTCAGCAAGGCAAGGCTTCAAATTCCCATGAATCAAAAGGAAGTGAAGGAAGAAGGGCTGCTCTTGCCTTCCTGACTGCCACCATCTTTTCCTCTGTTGCTGCTGCGTCTAACTCATCTGCAAATGCTGGAATCATTGAAGAATACCTTGAGAAGAGCAAAGCAAACAAGGAACTCAATGACAAGAAAAGGTTGGCAACAAGTGGTGCAAACTTTGCAAGAGCATACACTGTTCAGTTTGGAACCTGCAAATTCCCAGAGAACTTCACTGGCTGCCAAGATCTTGCTAAGCAAAAGAAAGTTCCATTTTTGAGTGATGACTTGGAGGTTGAATGTGAAGGTAAAGACAAGTACAAATGTGGTTCCAATGTCTTCTGGAAATGGTGA 2916 41.53 MDIVESTLDLTVQNPEVEELSSSNLTWTKFGNAKHYDEVALIPYTRVDEFIIGECSNVECPTRFHIERGRKRSKGSLKEFKSDEYLEYRMYWCSFGPENYGEGGGILPSRRYRLNTRNRAARPQSMRGCTCHFVVKRLYARPWLALLIYNERRHVNNSGFVCHGPLDRDAIGPGAGKVPYICNEIQQQTMSMIYLGIPEANIVEKHLEGLQRYCGPNAKVNSLASQYVHKLGMIIKRSSHELDLDDQASIKMWVERNKKSVFVYQDASESDSFILGIQTEWQLQQMIRFGEGSLIAADSTFGIKRIKYPLCTLLVFDSRQHALPVAWVITRSFAKPDVSKWMKALLTRAHMVDPGWKISGFLIDDAATEIDPIMLLVPFLYQNSVSKQLEINFWLLIWTLVIRDVFCCPILFSLWRIRRSWLRNIVKRCSNTEIQREMFKRLGEIVYSIWREVDTMTVLEEFTHDFADQTLFMEYFKGSWVPKIEMWLSSMRTLPLASQESSGAIESYHLKLKAKLFDDSHLGALQRVDWLVHKLTTELHSSYWLDRYADESDSFQNVKEEYIASTSWHRALQIPDSAVSLDDKDHLFAKVLSQKDSNLTNLVWNPGSEFSFCDCAWSKEGNLCKHVIKVNMICETHQGFQASMSFQSYKEILMNLCELPPDDSVSLDLSMALTHQMLDHIQKLVELHSSENISAVVNRLPLKWVSKKGRTSIGKPSSTMSLVGNSKVTKKAPAKKHRKRKRLSRLRKSHLIHTLTTIFHHLHNHSLFKTHDPKNTTIPFSLHIPTLSLSLETTFPLMATVSSTNLSCSYALSGAGQSELSKLNSKPSMASLVGSGRKLPLIRAQQGKASNSHESKGSEGRRAALAFLTATIFSSVAAASNSSANAGIIEEYLEKSKANKELNDKKRLATSGANFARAYTVQFGTCKFPENFTGCQDLAKQKKVPFLSDDLEVECEGKDKYKCGSNVFWKW 971
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 17288313 17293460 + Bda007942.1 Bda11g01386 16494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01386 971 Gene3D - 887 971 IPR044907 -
Bda11g01386 971 PANTHER OS09G0309100 PROTEIN 1 374 - -
Bda11g01386 971 PANTHER ZINC ION BINDING PROTEIN 1 374 - -
Bda11g01386 971 PANTHER ZINC ION BINDING PROTEIN 401 747 - -
Bda11g01386 971 Pfam Photosystem I reaction centre subunit N (PSAN or PSI-N) 841 971 IPR008796 GO:0009522|GO:0015979
Bda11g01386 971 ProSiteProfiles Zinc finger SWIM-type profile. 598 635 IPR007527 GO:0008270
Bda11g01386 971 PANTHER OS09G0309100 PROTEIN 401 747 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g00200 Bda-Chr11:2555542 Bda11g01386 Bda-Chr11:17288313 7.50E-86 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01386 - - vvi:100247174 1191.41