Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01433 ATGGGTGCACCAAAGAAAATTGGGTCGAGGATTTCTGACGACTCTGAGGAGTTGGCTCGTGTTTCCTTGCAGGCCATCCTTCTTGCTGACAGCTTTGCCACCAAGTTTCAGCCCATAACTCTCGAACGGCCTAAGGTATTACTTCCACTTGTGAATGTCCCAATGATAAATTATACCTTAGCATGGCTTGAATCTGCCGGTGTTGAAGAAGTTTTTGTATTTTGCTGTGCTCATTCAAGGCAAGTAATTGATTATTTGGAGAATTCTGAATGGTATTCTCAACCAGAGTTCTTGGTCTCAACAATAGAATCGCACAATTCTGTGAGTGCTGGCGATGCTCTGCGCTTAATCTACGAAAAGAATGTGATACATGGAGACTTTATCCTTATCACAGGAGATACAATAAGCAACATGTCACTTTCACAAGCTCTTCAGGAACACAAGGAAAGAAAGAAAAGAGATAGCAATGCAGTAATGACCATGATTATCAAACAATCGAAGCCCTCCCCCATCACTCACCAATCTCGTCTTGGTACTGATGAGCTGTTTATGGCAGTAGATCCTGACACTAAGCAACTACTGTATTATGAGGATAGAGCGGACCAATCAAAAGGGGCTATATATCTTGATAAGCTACTACTGATGGATAATCCTTTAATTTCTCTTCACAATGACAAACAGGATTGCTATATAGATATTTGTTCTCCAGAAGTCCTCAGTCTTTTCACAGATAACTTTGACTATCAGCATCTTCGACGCCACTTTGTCAAAGGATTGCTCGTCGATGATATCATGGGTTACAAGATCTTTACACATGATATTCACTCTAGCTATGCGGCTAGGATTGATAATTTTCGAAGCTATGACGCAATTAGCAAGGACATTATACAGAGGTGGTCATATCCATTCGTTCCAGATGTTAAATTCTTTGGAAATTCCACGACCAAACTTGAAAGACAGGGGATGTATAGAGCTTCAGATATTAGGCAAGCTCGTTCTGCTCTAATAGGTCCTTCTACTGTTATCGGAAAGAACACTGAAATCGGGTGCAACTCCAAAATTTCAAATTCAGTTGTTGGACAAGGATGCAAAATTGGATCAAACGTTTTGATAAAAGGTTCTTACATATGGGATAATGTTACTATCGAGGACGGCTGTAAACTAAGGCATGCAATTGTTTGCGATGGAGTGACCCTAAGATTGGGAGCTGAACTAGAACCTGGTGTAGTTTTGTCTTTCAATGTTGTTATAGGTCAACAATTTGTTGTTCCTGCATATTCAAAGGTGTCATTGTTTCAGCAACCAACCAAGTTAGATAGCGATGAGGAGCTGGAATATGCTGATAATACCAGTGTTATTATTGAAAGTAATGATTATTACTATCTATTTTCCTTTTGGAATTTGCATGACTCTTTGAAATTGATGTCAACAATTCTTGGTACTGGTGGTGTTGGACATATATGGTCAGATTTTGAAGGAAACATTGAGGAAAGATGGAGGCACTCAGTTGCACCCATTCCTGCGGATAAAGTTGCTGAGGCAATGCAAGCCAGAGATGATGACTTTGAGTTGTCTGCTCAAGATGGAGGCCTTCTTCCTCCTTCAGGAGAGTTGAAACCCAGTTCCAATGATTCTGAAGATGATGATAATGAAGATTCTAGGGACGACTCCACTTACTTTGAAAAAGAGGTGGAAGCAACTTTCTTAAGAGCTGTGCACGAAAATATTAAAGTAGACAACGTAATTTTGGAAGTGAACTCGTTACGATTATCATATAATAAAGAAGCTGCGGATTGTGCTGGGGCAATATTTTTTTCATTAATAAAATATTCCCTAGAAACTCCACATAGTTCTGCTAGCGAATTGTTGCAAAATGCTACAAGTACAATTACAAAATGGAAAAAACTTCTCAAGTCTTACCTTGCTGACTTGGATGAGGAGATAGAAGTAATTTTGAAATTTGAAGAGATGTGTGTGGAATCTGCCAAGGAATTTAATCCATACTTTGCGAAGATATTGTGTCACTTGTACGACCAAGAAATAATTCACGAGGAGGCCATTTTACGGTGGGAAGACGAGAAGAAGGACGCAGAGGAATCAGATAAAATTTTCATCAAGCAATCTGAGAAATTTATACAATGGTTGAGAGAGGCATCAGAGGAGGAAGAAGAAGAAGAGGGAGGAGAAGATGAATGA 2196 39.53 MGAPKKIGSRISDDSEELARVSLQAILLADSFATKFQPITLERPKVLLPLVNVPMINYTLAWLESAGVEEVFVFCCAHSRQVIDYLENSEWYSQPEFLVSTIESHNSVSAGDALRLIYEKNVIHGDFILITGDTISNMSLSQALQEHKERKKRDSNAVMTMIIKQSKPSPITHQSRLGTDELFMAVDPDTKQLLYYEDRADQSKGAIYLDKLLLMDNPLISLHNDKQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLVDDIMGYKIFTHDIHSSYAARIDNFRSYDAISKDIIQRWSYPFVPDVKFFGNSTTKLERQGMYRASDIRQARSALIGPSTVIGKNTEIGCNSKISNSVVGQGCKIGSNVLIKGSYIWDNVTIEDGCKLRHAIVCDGVTLRLGAELEPGVVLSFNVVIGQQFVVPAYSKVSLFQQPTKLDSDEELEYADNTSVIIESNDYYYLFSFWNLHDSLKLMSTILGTGGVGHIWSDFEGNIEERWRHSVAPIPADKVAEAMQARDDDFELSAQDGGLLPPSGELKPSSNDSEDDDNEDSRDDSTYFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKEAADCAGAIFFSLIKYSLETPHSSASELLQNATSTITKWKKLLKSYLADLDEEIEVILKFEEMCVESAKEFNPYFAKILCHLYDQEIIHEEAILRWEDEKKDAEESDKIFIKQSEKFIQWLREASEEEEEEEGGEDE 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 19447973 19455926 - Bda008017.1 Bda11g01433 16541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01433 731 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Bda11g01433 731 Gene3D Hexapeptide repeat proteins 305 451 - -
Bda11g01433 731 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 7 726 - -
Bda11g01433 731 SUPERFAMILY ARM repeat 560 718 IPR016024 -
Bda11g01433 731 CDD W2_eIF2B_epsilon 560 719 IPR044123 GO:0005085|GO:0031369
Bda11g01433 731 Gene3D - 547 726 - -
Bda11g01433 731 Pfam Bacterial transferase hexapeptide (six repeats) 339 373 IPR001451 -
Bda11g01433 731 Pfam eIF4-gamma/eIF5/eIF2-epsilon 646 725 IPR003307 GO:0005515
Bda11g01433 731 SUPERFAMILY Trimeric LpxA-like enzymes 268 430 IPR011004 -
Bda11g01433 731 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
Bda11g01433 731 SMART 542_3 634 721 IPR003307 GO:0005515
Bda11g01433 731 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Bda11g01433 731 PANTHER - 7 726 - -
Bda11g01433 731 ProSiteProfiles W2 domain profile. 554 725 IPR003307 GO:0005515
Bda11g01433 731 CDD LbH_eIF2B_epsilon 341 419 - -
Bda11g01433 731 MobiDBLite consensus disorder prediction 525 557 - -
Bda11g01433 731 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 304 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda03g01283 Bda-Chr3:22325291 Bda11g01433 Bda-Chr11:19447973 5.06E-20 dispersed
Bda04g00764 Bda-Chr4:56835668 Bda11g01433 Bda-Chr11:19447973 0 dispersed
Bda07g00801 Bda-Chr7:9514247 Bda11g01433 Bda-Chr11:19447973 6.78E-13 dispersed
Bda07g01142 Bda-Chr7:13536155 Bda11g01433 Bda-Chr11:19447973 5.12E-08 dispersed
Bda11g01433 Bda-Chr11:19447973 Bda14g01372 Bda-Chr14:16121556 3.25E-07 dispersed
Bda11g01433 Bda-Chr11:19447973 Bda09g00482 Bda-Chr9:6307787 3.44E-14 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01433 K03240 - mnt:21393535 1108.2