Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01453 GCCATGCCTACTCAATATTCTGATCAGCCGCTGTTGCTCAACGAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGCAGCTTATGGCTCCGGGGAGAAGATTCATGTGATCGGAATCGGAGAAGATGGCGGTGATTCCATCGGGACACCGCCATTCTCGTGGAAAAAGCTCTGGCTCTTCACCGGACCTGGGTTTTTGATGAGCATAGCGTTTCTCGATCCGGGGAATTTGGAAGGAGATCTTCAGGCGGGTGCGGTGGCTGGGTATTCGCTTTTGTGGCTGCTGCTGTGGGCTACGGCTATGGGACTCTTGGTGCAGCTCCTGGCCGCGAGACTCGGCGTGGCAACTGGGCGGCACCTGGCGGAGCTGTGCCGAGACGAGTACCCTAAGTGGGCGAGGATGGTGCTTTGGGTAATGGCGGAGTTGGCTCTGATAGGGGCTGATATACAGGAGGTCATCGGAAGTGCCATTGCTATAAAGATTTTGAGTAATGGGTTTTTCCCTCTTTGGTCTGGTGTCATCATCACTGCTTTAGATTGCTTTGTATTTCTTTTTCTCGAAAACTATGGCGTAAGGAAATTAGAAGCAGTTTTTGCCTTCCTTATAGCTACAATGGCTGTCTCATTTGCATGGATGTTTGGCGAAACAAAGCCTAGTGGAACTGAGCTTCTTCTCGGTATTCTGATTCCGAAACTAAACTCAAGAACAATTCGCCAGGCAGTTGGAGTAGTGGGTTGCATAATCATGCCCCACAATGTATTCTTACACTCGGCTCTGGTTCAATCGAGAGAAATCGACCATCGAAATCGAAGCCGAGTTCGAGAAGCTTTACGATACTACTCTATAGAATGCACTGTTGCCCTTATCCTCTCCTTCGTCATCAATCTCTTTGTCACAACAGTTTTTGCAAAAGGGTTTTATAACACGGACATAGCCGATAGTATCGGCCTCGTCAATGCCGGCCAGTATCTTCAATCCAAATACGGAGGAGTTTTTCCGATTCTATACATTTGGGGTATTGGCTTACTTGCAGCTGGTCAAAGTAGCACCATTACAGGAACGTATGCTGGACAGTTCATAATGGGAGGGTTCTTGAATTTGAGGATGAAAAAATGGATTCGAGCTCTGATCACCCGAAGCTTTGCGATTGTTCCAACCATGGCGGTTGCCCTTGCGTTCGACACTTCTGAGGATGCTTTGGATGTTCTGAACGAATGGCTTAATGTTCTTCAGTCTATTCAGATCCCTTTTGCACTTATTCCCCTTCTCTATTTGGTCTCCAAGGAGCGGATCATGGGCAATTTTAAAATCGGACATCTTCTAAAGATGGTCTCCTGGCTGGTGGCTGCTTTGGTGATGGCCATTAATGGGTATCTGTTGGTGGACTTCTTCTCCTCTGAAGTAAATGGAGTTTTCTTCACCTCTGTAGTTGGCGTTTTCACGGCTGCATATCTTGCCTTCATCGTTTATCTCATCTCCCAGAGCATTACAGTTTCATGGTGGACGAAGTTAATGCCGGCCAAGGTTTCGACAGATTTGGTAATTTAA 1545 47.06 AMPTQYSDQPLLLNEEEKEEEEEEAAYGSGEKIHVIGIGEDGGDSIGTPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAVAGYSLLWLLLWATAMGLLVQLLAARLGVATGRHLAELCRDEYPKWARMVLWVMAELALIGADIQEVIGSAIAIKILSNGFFPLWSGVIITALDCFVFLFLENYGVRKLEAVFAFLIATMAVSFAWMFGETKPSGTELLLGILIPKLNSRTIRQAVGVVGCIIMPHNVFLHSALVQSREIDHRNRSRVREALRYYSIECTVALILSFVINLFVTTVFAKGFYNTDIADSIGLVNAGQYLQSKYGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRMKKWIRALITRSFAIVPTMAVALAFDTSEDALDVLNEWLNVLQSIQIPFALIPLLYLVSKERIMGNFKIGHLLKMVSWLVAALVMAINGYLLVDFFSSEVNGVFFTSVVGVFTAAYLAFIVYLISQSITVSWWTKLMPAKVSTDLVI 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20187721 20190001 + Bda008042.1 Bda11g01453 16561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01453 514 Pfam Natural resistance-associated macrophage protein 77 437 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 54 431 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 MobiDBLite consensus disorder prediction 1 27 - -
Bda11g01453 514 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 17 509 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PRINTS Natural resistance-associated macrophage protein signature 239 262 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PRINTS Natural resistance-associated macrophage protein signature 373 390 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PRINTS Natural resistance-associated macrophage protein signature 345 364 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PRINTS Natural resistance-associated macrophage protein signature 135 161 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PRINTS Natural resistance-associated macrophage protein signature 190 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PRINTS Natural resistance-associated macrophage protein signature 407 426 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PRINTS Natural resistance-associated macrophage protein signature 165 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 Hamap Divalent metal cation transporter MntH [mntH]. 41 463 IPR001046 GO:0016020|GO:0030001|GO:0046873
Bda11g01453 514 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 17 509 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01453 Bda-Chr11:20187721 Bda14g01264 Bda-Chr14:13309200 0 wgd
Bda11g01453 Bda-Chr11:20187721 Bda03g00192 Bda-Chr3:1551583 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01453 K21398 - qsu:112033213 803.127