Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01457 ATGGCCGGTCAATCTGATCCTCATCTCTCTCTATTTTCACCTGAGGAGGTAGAGTTTGTGGCTGAAGATGAGATCGTAGAAATTGTTCCTAACATGAGAATGGATTCCCTCAATTTGATCTGTGGTGATTATGGTCCATTCTTTCCTCAACTAGTGGCTCAAGTACCATTGTGGCTAGCAATTGCTTTGAAAAAGAGAGGGAAATGTGCTATTCGATCTTCAGAATGGATGTCTATCGAAAAGTTGACTCAGATTTTAGAAGTAGAACGAGAGTCTCAAGGAGCATTCCAGATACTGCCATTTCATTATGTGGAAATCTCAAAGCTTCTTTTTGACCATGCACATAGCAACATACAAGACATATACATGGTTAGATATCTTGTCGAAGATATTAAAGATGTTAGGTTTCACAAAGTTGAAACTAGCTTAGAGGCAATTGATACACGAACATCTGCAGTAAAGATTAAAGATCTGTCTGCCATGGAAGTAAATGTTGTTCGCCCATTTGTTATCAGATCACTACAAGCAATATATAATCATAATAGCCCCGAGTTGGTTCCAAACCAAGAGAGAGTGTCCGACAGAGTACAGCAAGAGCATGATCCTTGTCAAAGAGTAAGTTCTTTTTTAATTTTA 636 38.52 MAGQSDPHLSLFSPEEVEFVAEDEIVEIVPNMRMDSLNLICGDYGPFFPQLVAQVPLWLAIALKKRGKCAIRSSEWMSIEKLTQILEVERESQGAFQILPFHYVEISKLLFDHAHSNIQDIYMVRYLVEDIKDVRFHKVETSLEAIDTRTSAVKIKDLSAMEVNVVRPFVIRSLQAIYNHNSPELVPNQERVSDRVQQEHDPCQRVSSFLIL 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 20372461 20374544 - Bda033156 Bda11g01457 16565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01457 212 CDD GINS_A_psf2 66 182 - -
Bda11g01457 212 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 1 198 IPR007257 GO:0005634|GO:0006260
Bda11g01457 212 SUPERFAMILY GINS helical bundle-like 75 181 IPR036224 -
Bda11g01457 212 SUPERFAMILY PriA/YqbF domain 12 71 - -
Bda11g01457 212 PIRSF GINS_PSF2 2 208 IPR007257 GO:0005634|GO:0006260
Bda11g01457 212 Pfam GINS complex protein 54 162 IPR021151 -
Bda11g01457 212 Gene3D - 78 193 - -
Bda11g01457 212 Gene3D - 12 77 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda09g00567 Bda-Chr9:7828022 Bda11g01457 Bda-Chr11:20372461 2.52E-145 dispersed
Bda09g00575 Bda-Chr9:8036192 Bda11g01457 Bda-Chr11:20372461 6.06E-150 dispersed
Bda11g01457 Bda-Chr11:20372461 Bda06g00222 Bda-Chr6:3792777 4.92E-149 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01457 K10733 - csv:101212053 335.495