Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01470 ATGATGCAATTCTCTGAAACCCCACAGCCACCATTGCACCAAATCAGCCCACCACCAAATTCCGCCATGAGCAAAACCCAAATTCAAAGAGGTCAGCCATGGCCGGGATTTCCCACATCCAAGGCATTGGGAAACTTCGGGGACACCAACTGCATGGAACAATTGCTAGTCCACTGCGCCAACGCCATCGAAAGCAACGATGCCACTCTCGCCCAACAGATCCTTTGGGTCCTAAACAACATAGCCCCTCCCGACGGCGACTCAAATCAGAGGCTCACCTCCGGCTTCCTTCGAGCTCTCATTTTGCGCGCAGCCAATAGCGGAAGCTGCAAAATGCTTGCAGCTATGGTGAACGCTCGTAACAATCTGGCTATCGACACCCACAAATTCTCTGTCATTGAGCTCGCTAGCTTCGTAGACCTGACACCTTGGTATAGATTCGGCTTCACTGCAGCCAATGCAGCTATTATAGACGCTATTGAAGGGTTCTCTTCCATCCATATTGTACATTTAAGCTCAACTCATTGCATGCAAATCCCGACGCTAATCGACGCCATTGCTAGTCGTTACGAGGTTCCGCCATTGATAAAGCTCACAGTTGTTTCAGGTGCGACAGAAGATATACCCCCTATACTTGACCTTTCTTTCGACGAATTGGGTTCAAAGCTGGTGAATTTCGCAAGGTATAGAAACGTAGACATGGAATTTAGAGTGGTTCCTTCTAATTATACCAATGGATTTGCTAACTTGATCGAACAACTTCGATTGCAAAATTTAGTTTACGCAGAAAGTGGCGAGGCGTTAGTTATTAACTGTCACATGATGCTCCATCATATTCCAGAACAACCCCTTTCTCCAAATCAAAACATAAATCCAAACCCACTATCTTTTGAATCTTCCTCTTCGCTTCGGACAATGTTTTTGAAAGCCATTCGAAGCCTAGAGCCCACGATTGTAGTCTTAATTGATGAAGATGCCGACTTGACATCAAATAACTTAGTTAGCAGATTAAGAGCAGCCTTCAACTACTTATGGATTCCATATGATACAGTTGATACTTTTCTACCAAAAGGAAGCCATCAGAGGCAGTGGTACGAAGCTGATATTTGCTGGAAGATTGAGAATGTGATAGCCCAAGAGGGTCTTCAGAGAGTTGAGCGACTAGAACCGAAGAACCGGTGGGTTCAGCGAATGATAAATGCAAATTTTAGAGGGGTTTCGTTTGGGGAAGATGGTGTTGCAGAGGTGAAGTTGATGCTTGATGGGCATTCAGCTGGGTGGGGATTGAAGAAGGAAGACGATGATCTTGTGCTCACATGGAAAGGGCATAACGTTGTTTTTGCAACTGCTTGGGTGCCTGCTTAA 1365 45.64 MMQFSETPQPPLHQISPPPNSAMSKTQIQRGQPWPGFPTSKALGNFGDTNCMEQLLVHCANAIESNDATLAQQILWVLNNIAPPDGDSNQRLTSGFLRALILRAANSGSCKMLAAMVNARNNLAIDTHKFSVIELASFVDLTPWYRFGFTAANAAIIDAIEGFSSIHIVHLSSTHCMQIPTLIDAIASRYEVPPLIKLTVVSGATEDIPPILDLSFDELGSKLVNFARYRNVDMEFRVVPSNYTNGFANLIEQLRLQNLVYAESGEALVINCHMMLHHIPEQPLSPNQNINPNPLSFESSSSLRTMFLKAIRSLEPTIVVLIDEDADLTSNNLVSRLRAAFNYLWIPYDTVDTFLPKGSHQRQWYEADICWKIENVIAQEGLQRVERLEPKNRWVQRMINANFRGVSFGEDGVAEVKLMLDGHSAGWGLKKEDDDLVLTWKGHNVVFATAWVPA 454
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21095973 21097337 - Bda008065.1 Bda11g01470 16578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01470 454 PANTHER SCARECROW-LIKE PROTEIN 32 10 452 - -
Bda11g01470 454 Pfam GRAS domain family 52 451 IPR005202 -
Bda11g01470 454 MobiDBLite consensus disorder prediction 18 34 - -
Bda11g01470 454 ProSiteProfiles GRAS family profile. 43 452 IPR005202 -
Bda11g01470 454 MobiDBLite consensus disorder prediction 1 34 - -
Bda11g01470 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 10 452 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda10g00873 Bda-Chr10:43218974 Bda11g01470 Bda-Chr11:21095973 3.80E-31 dispersed
Bda11g01470 Bda-Chr11:21095973 Bda07g00332 Bda-Chr7:4419946 1.90E-40 dispersed
Bda15g00942 Bda-Chr15:17313482 Bda11g01470 Bda-Chr11:21095973 4.05E-130 transposed
Bda11g01470 Bda-Chr11:21095973 Bda14g01275 Bda-Chr14:13595393 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
16696 PF03514 GRAS 1.20E-87 CL0063 Bda TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01470 - - tcc:18611261 742.651