Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01472 | ATGAGTTGCAACGGGTGCAGAGTTCTCAGGAAAGGGTGCAGCGAGTCTTGTATTCTGCGGCCATGTTTACAGTGGATTGAGAGCGCTGAAGCTCAAGCCCACGCCACCACTTTTGTAGCTAAGTTCTTTGGCCGAGCTGGTCTCATGTCCTTTATCTCCGCCGTGCCTGAATCTCAGAGACCCTCGTTGTTTCAGTCACTGCTATTCGAAGCGTGTGGGCGGACAGTGAATCCTGTCAATGGCGCCGTCGGGCTTCTCTGGACGGGAAACTGGCATATGTGCCAGCAGGCGGTGGAAACTGTTCTTCGGGGAGGGACTTTGCGGGCTTTGCCGGAGGTTTTCGCCGGAGGAGGGTCTGGTTCCCCTTCTGACGAGGCGTCCGATATGGATTGTACGGACATATGGAAGCTCCGAGATCCGAAATTTAGTTCACGGCTCTCGAATTCTAGAAACAGACTTTCCCCTAACTGCAGGCGATTGGAGGGATTAATGAATCCGCAGCCCCCTCTCACCGATCTCGACCCCCGCCAGACGCCCATTGTGCAGGCCAAATTGTTGGAGCAACGAAGGCCAGGAAGCCCGTCGATGAATTCGGAGGAATCTGTGACAACAACATGCTTCCAAAGCAGTGTGGTCAGCGATCAGTACACACATGGAGGAACGAGAAAGCTTCTCAACTTATTCATCTAA | 690 | 53.48 | MSCNGCRVLRKGCSESCILRPCLQWIESAEAQAHATTFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHMCQQAVETVLRGGTLRALPEVFAGGGSGSPSDEASDMDCTDIWKLRDPKFSSRLSNSRNRLSPNCRRLEGLMNPQPPLTDLDPRQTPIVQAKLLEQRRPGSPSMNSEESVTTTCFQSSVVSDQYTHGGTRKLLNLFI | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21231420 | 21234503 | - | Bda008069.1 | Bda11g01472 | 16580 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01472 | 229 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN | 1 | 229 | - | - | |
Bda11g01472 | 229 | ProSiteProfiles | LOB domain profile. | 1 | 107 | IPR004883 | - | |
Bda11g01472 | 229 | Pfam | Lateral organ boundaries (LOB) domain | 2 | 100 | IPR004883 | - | |
Bda11g01472 | 229 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 38 | 1 | 229 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bda10g00277 | Bda11g01472 | CCT | |
Bda10g00277 | Bda11g01472 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00585 | Bda-Chr1:32868651 | Bda11g01472 | Bda-Chr11:21231420 | 2.42E-51 | dispersed | |
Bda01g01171 | Bda-Chr1:46897207 | Bda11g01472 | Bda-Chr11:21231420 | 1.44E-54 | dispersed | |
Bda01g01591 | Bda-Chr1:51762676 | Bda11g01472 | Bda-Chr11:21231420 | 2.61E-48 | dispersed | |
Bda10g00002 | Bda-Chr10:51782 | Bda11g01472 | Bda-Chr11:21231420 | 2.49E-95 | dispersed | |
Bda11g01472 | Bda-Chr11:21231420 | Bda13g01768 | Bda-Chr13:40996293 | 1.76E-46 | dispersed | |
Bda11g01472 | Bda-Chr11:21231420 | Bda08g01358 | Bda-Chr8:54032646 | 8.39E-59 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16697 | PF03195 | LOB | 1.40E-25 | No_clan | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01472 | - | - | zju:107424931 | 308.145 |