Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01477 ACCATGAGAGCTCATTATTTGAGCTTCTTTTTCTTTCTCTCATTTCTCATTTTCCTTCAAACCATCTCCATCAATGGTTCCTGCAAAGCTCGACCTACCCTTCACAGAAGAGCTCTGCACCAGCCACTTTTCCCGGTGAGCTCCGCGCCTCCACCGGAATCCGATTTAACTCCGCCGCCGCCGCCTACTCCGTCTGACCCTTCTTCAGGTACAGACGACCAGCCCTTCTTTCATGAATCCCCTTCAGGTTCCGTTCCAGATCACTATCAACCTCCTCCTTCGTCTTCCAATGTCACTTCGTCGATTCCGGAAGCTACTCAGCCGTCCAAGGGGGCGAAGACAGTCGCGATTGCAATCTCCGTCGGAATTGTCACTCTCGGAATGCTCTCTGCTCTCGCATTCTTCCTATATCGTCACCGGTCAAAACACTCTGGCGAGTCTCAGAAGCTAGTCGGAGGCCCCAATGGCGATGGATATCCAGACGACACTAGAGTGCCGCCGTCCAGCTTTCTTTATATCGGCACGGTCGAACCTAGTCAAAACTCCGTCGTGGAACGGAGAATAGCAAACGGCGCCAATAGTTCTCCTTATCGCAAGCTTAATTCCATTAAAATGTCGGATCGTTACCGTCCTAGTCCTGAATTGCAGCCGCTTCCACCCCTATTGAAACCTCCGGTGGCGATTTCTTCGTCTCCATCGTCATCTTCCAACGAGGAAAGCCAAGAGACGGCATTTCACACGCCGCAAGGCTCGTCGGTTGTCAGTCACGACGACGGAAACCATGTTTCGGCAATTACTTCAAAAGCCGATCTTAATTCAAATATTCGTGTTCCCCATTCAAAAAGAACTTCTCCGAAATCACGGCTTTCAGTCGCGTCGTCAAAGGTCGGTCAGTCTCCAGTCCCACCGTCGCCTCCTCCTCCGTCCCTTTTTCAGCAGCCTCAGCCTCTGATTTCATCAAACGGACCGAAATTTTTAAAGCATCCATCTCCACCGAATTTGTCTATCCTTCATTCACTTAGCAGTTCATATCCAAATCCAAAAGTACTGAACAAACCTGGTCTTCCTCTTCAACCTCCCCCTCCACCCCCACCTCCTCCGCCGCCATTAATCTCAAATCCTCAGAAAGTTGGATCTTCAGAAAGAAGTATTCCTACCTCGACTCCTACATTGTCGTCAGTGACTTGGACTGCAACCAAATCCAAATCAAACTCTCCTCGTAGTTCTAAGTTGTCAATTTCTGTTGAACAAGTCCCCAGAACCGTAAGCCCGCCGGAGAAACTTGAAGCAGACGACCCAGAGAGTGCTAAACCAAAATTGAAGCCCCTGCATTGGGACAAAGTGCGGGCAACTTCCAACCGAGCCACAGTTTGGGACCAACTGAAATCAAGCTCATTCCAGGTAAATGAGGACATGATGGAATCTCTTTTCGGCTTCAACTCTGCAAATCCTGTCTCAAAAGAGACAGGAAGAAAGACCACTTTCTCTTCCTCCATGGAAAAGGAAACTAGGGTGTTGGACCCAAAGAAATCACAGAACATTGCAATACTACTCAGAGCACTAAACGTGACAAGGGATGAAGTTGCAGAAGCTCTTTCAGATGGTAATCCAGAATGCTTAGGTGCAGAGCTTCTGGAAACTCTAGTAAAAATGGCCCCAACCAAAGAAGAAGAAATAAAACTCAGAGACTATCGAGGCGACGTCTCGAAACTCGGGTCTGCCGAACGATTTCTAAAGGCAGTGCTCGATATCCCATTTGCGTTCAAAAGGGTTGAAGCCATGCTATACAGAGCAAATTTCGACACAGAAGTGAAATATCTGAGGAAAGCATTTCAAGCACTAGAGGCAGCGAGCGAAGAACTCAAGAGCAGCCGACTTTTCCTTAAACTCCTCGAAGCTGTTCTTAAGACGGGAAATCGAATGAACGTGGGAACGAATCGTGGGGAAGCGACAGCGTTCAAGCTCGAGACTCTCTTAAAACTAGTAGATATAAAAGGCACGGACGGGAAGACAACTTTGCTTCACTTTGTCGTCCAAGAAATAATTCGATCCGAAGGCGAAGGTGGCGAATCGTTGAATGGAAATCTTCCAAATAACGGGCAGTCAAACATGAAGGAGGACCAATTTAAGAAACAAGGATTGAAGATTGTGGCTGGACTGAGCAGAGACCTCACAAATGTCAAAAAAGCAGCCAATATGGATGCAGATGTCTTAAGCAGCTATGTTTCAAAGCTAGAAATAGGTCTCGAAAAAGTACGATTGGTTTTACAAATCGAGAAGCCGGACGGGCAGGCGAAATTCTTCAACTCCATGAACTTGTTTCTCAAGGAGGCAGAGGGGGAAATAATTTGGATCAAAGCGGACGAAAAAAAGGTGTTATGGCTTGTAAAAGGAGTCACAGAATACTTCCATGGAAATGCTGCAAAAGAAGAAGCTCATCCTTTTAGAATATTTATGATAGTGAGAGATTTCTTAAGCATATTGGATCAAGTTTGCAAGGAAGTAGGGAGGATCCATGAAGGAGTAGTGATGGGTTCGGCTCGATCTTTTCGAATATCTTCCACTGTTTCATTGCCGGTCCTCAAACGTTATAACACCAGACGAGATCAAAGTTCCGACGAAGAAAGCTCATCGTCCTGA 2640 46.86 TMRAHYLSFFFFLSFLIFLQTISINGSCKARPTLHRRALHQPLFPVSSAPPPESDLTPPPPPTPSDPSSGTDDQPFFHESPSGSVPDHYQPPPSSSNVTSSIPEATQPSKGAKTVAIAISVGIVTLGMLSALAFFLYRHRSKHSGESQKLVGGPNGDGYPDDTRVPPSSFLYIGTVEPSQNSVVERRIANGANSSPYRKLNSIKMSDRYRPSPELQPLPPLLKPPVAISSSPSSSSNEESQETAFHTPQGSSVVSHDDGNHVSAITSKADLNSNIRVPHSKRTSPKSRLSVASSKVGQSPVPPSPPPPSLFQQPQPLISSNGPKFLKHPSPPNLSILHSLSSSYPNPKVLNKPGLPLQPPPPPPPPPPPLISNPQKVGSSERSIPTSTPTLSSVTWTATKSKSNSPRSSKLSISVEQVPRTVSPPEKLEADDPESAKPKLKPLHWDKVRATSNRATVWDQLKSSSFQVNEDMMESLFGFNSANPVSKETGRKTTFSSSMEKETRVLDPKKSQNIAILLRALNVTRDEVAEALSDGNPECLGAELLETLVKMAPTKEEEIKLRDYRGDVSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDTEVKYLRKAFQALEAASEELKSSRLFLKLLEAVLKTGNRMNVGTNRGEATAFKLETLLKLVDIKGTDGKTTLLHFVVQEIIRSEGEGGESLNGNLPNNGQSNMKEDQFKKQGLKIVAGLSRDLTNVKKAANMDADVLSSYVSKLEIGLEKVRLVLQIEKPDGQAKFFNSMNLFLKEAEGEIIWIKADEKKVLWLVKGVTEYFHGNAAKEEAHPFRIFMIVRDFLSILDQVCKEVGRIHEGVVMGSARSFRISSTVSLPVLKRYNTRRDQSSDEESSSS 879
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 21468272 21471468 + Bda008076.1 Bda11g01477 16585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01477 879 MobiDBLite consensus disorder prediction 89 108 - -
Bda11g01477 879 PANTHER FORMIN-RELATED 10 879 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bda11g01477 879 MobiDBLite consensus disorder prediction 334 348 - -
Bda11g01477 879 SUPERFAMILY Formin homology 2 domain (FH2 domain) 359 839 - -
Bda11g01477 879 MobiDBLite consensus disorder prediction 143 166 - -
Bda11g01477 879 MobiDBLite consensus disorder prediction 299 313 - -
Bda11g01477 879 Pfam Formin Homology 2 Domain 433 828 IPR015425 -
Bda11g01477 879 MobiDBLite consensus disorder prediction 227 298 - -
Bda11g01477 879 ProSiteProfiles Formin homology-2 (FH2) domain profile. 430 854 IPR015425 -
Bda11g01477 879 MobiDBLite consensus disorder prediction 208 439 - -
Bda11g01477 879 MobiDBLite consensus disorder prediction 45 68 - -
Bda11g01477 879 MobiDBLite consensus disorder prediction 43 111 - -
Bda11g01477 879 Gene3D Formin, FH2 domain 425 838 IPR042201 -
Bda11g01477 879 SMART it6_source 430 843 IPR015425 -
Bda11g01477 879 MobiDBLite consensus disorder prediction 425 439 - -
Bda11g01477 879 PANTHER FORMIN-LIKE PROTEIN 6 10 879 - -
Bda11g01477 879 MobiDBLite consensus disorder prediction 374 419 - -
Bda11g01477 879 MobiDBLite consensus disorder prediction 352 373 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01477 Bda-Chr11:21468272 Bda13g00633 Bda-Chr13:7306308 3.28E-122 dispersed
Bda07g01671 Bda-Chr7:31009231 Bda11g01477 Bda-Chr11:21468272 4.22E-85 transposed
Bda08g01073 Bda-Chr8:23385183 Bda11g01477 Bda-Chr11:21468272 5.29E-138 transposed
Bda11g01477 Bda-Chr11:21468272 Bda14g01277 Bda-Chr14:13667115 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01477 - - cmo:103497354 980.704