Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01478 | ATGGAGAGGTTTCTGGAGGAGAACTTTGGAGGTGTGAAGCCGAAGCACTCATCGGAGGAGGCTTTGCAGAGATGGAGGAAGGTTTGTGGTGTGGTGAAGAATCCGAAGCGGAGATTTCGCTTCACTGCTAATCTCTCTAAGCGGTATGAGGCAGCTGCCATGCGTCAGAACAATCAGGAAAAGTTGAGAATTGCAGTTTTGGTTTCGAAAGCCGCATTTCAATTTATCCAAGGTTCCCATAATTTGTTTCATGATCCTACAGGTGTTCATCCTAGTGATTACACTGTGCCCAAAGAGGTTAAAGAGGCAGGTTTTGAAATTTGTGGCGATGAATTGGGATCCATTGTCGAAGGCCATGATCTGAAGAAGCTTAAATTTCATGGTGGGGTTTCTGGTATTGTAGAAAAGCTCTCCACATCGACAACAAACGGGCTTTCTGTTGATTCTGCTTTGCTGAGTCGGAGGCAAGAGATCTACGGAGTCAATAGATTCACGGAGAGTGAATCTAGGAGTTTCTTCGTTTTCGTATGGGAAGCCCTTCAAGACATGACTCTCATGATCCTAGGAGTTTGCGCATTTGTATCACTGATCGTTGGGATTATCATGGAAGGATGGCCGAAAGGGTCCCACGACGGGCTCGGCATTGTTGCCAGCATCTTGCTGGTTGTGTTCGTCACTGCAACTAGTGATTATCGCCAGTCTTTGCAGTTCAAGGATTTGGACAAGGAGAAAAAGAAGATATCAATCCAAGTTACGAGAAGTGGTTATAGGCAGAAAATGTCAATATACGACCTACTTCCGGGCGATATTGTGCATCTTTCTATCGGAGACCAAGTCCCCGCGGATGGATTATTTATTTCAGGATTCTCTGTGCTAATTGACGAATCCAGTTTGACCGGGGAGAGTGAGCCGGTAATGGTCAGTTCTCAGAGTCCGTTTCTCCTTTCCGGAACCAAGGTTCAAGACGGATCGTGCAAGATGATCGTTACTACTGTCGGCATGAGAACTCAATGGGGTAAATTGATGGCAACCCTTAGTGAGGGTGGAGATGATGAAACTCCATTGCAGGTTAAATTAAATGGAGTGGCAACTATTATTGGAAAAATTGGTCTTTTCTTTGCTGTGGTAACTTTTGCTGTATTGGTTCAAGGGTTGTTTAGCAGTAAAATTCGAGAGGGTACCCACTGGAGCTGGTCCGGAGATGATGCCCTGCAAATGCTTGAATTCTTTGCTGTTGCAGTTACAATTGTTGTCGTGGCTGTACCGGAAGGGCTGCCATTGGCTGTGACCTTGAGCCTTGCCTTTGCCATGAAGAAGATGATGAACGATAAAGCACTGGTTCGACATCTTGCAGCCTGTGAGACAATGGGATCGGCCACAAGTATCTGTAGCGACAAGACTGGAACATTAACGACCAATCACATGACTGTTGTCAAATCATGCATTTGTATGAATGTGGAAAATGCCGAAAAGGCTTCCGTCTTGATCTCAACTCTCCCTGAATCTGCTAAGAAGCTACTTCTTCAGTCAATATTCAACAACACTGGAGGAGAAGTGGTGGTGAACAAAGATGGAAAGCGCGAGATTTTGGGAACACCAACCGAGACTGCATTATTAGAATTTGGTTTGTCACTCGGTGGAGATTTTCTGACTGAGAGGCAAGCCTGTAAGCTTCTTAAAGTTGAGCCATTCAACTCTCTGAAAAAGCGAATGGGAGTAATGATCGAACTTCCCGAAGGTGGCATAAGAGCTCATACCAAAGGTGCTTCAGAAATAGTTCTAGCTGCCTGCGAAAAGGTCATAAATTCAAATGGGGAGATCGTGCCTCTCGATGAAGGATCCGTTAAGCATCTCAACAGCACTATCGATCAGTTCGCAAATGAAGCTCTCCGAACTCTATGCCTTGCCTATATGGAACTTGAAAATGGAGTCTCTGTAGAGAATCCTATTCCCTCTACTGGGTTTACTTGCATAGGAATTGTGGGTATTAAAGATCCGGTTCGTCCTGGTGTAAAGGAGTCAGTGGCCGTATGTCGTTCAGCTGGCATAACTGTGAGAATGGTTACGGGAGATAATATCAATACGGCTAAGGCAATAGCTAGGGAATGTGGGATTCTCACTGACGATGGCTTAGCTATAGAAGGTCCAGATTTTCGAGAGAAGAGCCAGAAGGAGTTGCTTGAACTTATCCCTAAAATTCAGGTGATGGCTAGATCTTCACCTCTAGATAAGCATACACTTGTGAAACACCTGCGAACCACATTTGATGAAGTTGTTGCTGTAGTGGCTAAAGAGAGTGCTGATGTCATTATTCTAGATGATAATTTCTCTACAATCGTCACTGTGGCAAAATGGGGTCGTTCAGTTTATGTAAACATTCAAAAATTTGTACAGTTTCAGCTGACTGTTAATATCGTAGCATTGATAGTTAACTTCTCATCAGCATGTTTAACAGGGACTGCTCCGCTGACAGCGGTTCAGCTTTTGTGGGTGAACATGATTATGGATACTTTAGGTGCACTAGCTCTTGCAACTGAGCCTCCAAATGATGAACTAATGAAGCGAACCCCAGTGGGAAGAAAAGGAAATTTCATTAGCAATGTTATGTGGAGGAACATCTTAGGACAATCCTTGTATCAGTTTTTTGTTATATGTCTTCTTCAGGCAAAAGGAAAAGCAATATTCGGTCTTCTCGGCCCAGATTCCGAGCTGATCCTCAATACCCTTATCTTCAATTCATTTGTTTTCTGTCAGATTTTCAACGAAGTAAGTTCGCGCGAGATGGAAGAAATAGACGTCTTCAAAGGCATTCTGGATAACTATGTTTTTGTTGGTGTTCTCACTTGCACGGTTTTCTTCCAAATCATAATTATCGAGTTTCTCGGAACGTTTGCCAATACCACACCCCTTACTTTGCCTCAATGGTTTGTTAGTATACTTATCGGGTTTTTGGGGATGCCGATTGCGGCTTGGTTGAAGACGATTCCAGTGTAA | 2994 | 43.92 | MERFLEENFGGVKPKHSSEEALQRWRKVCGVVKNPKRRFRFTANLSKRYEAAAMRQNNQEKLRIAVLVSKAAFQFIQGSHNLFHDPTGVHPSDYTVPKEVKEAGFEICGDELGSIVEGHDLKKLKFHGGVSGIVEKLSTSTTNGLSVDSALLSRRQEIYGVNRFTESESRSFFVFVWEALQDMTLMILGVCAFVSLIVGIIMEGWPKGSHDGLGIVASILLVVFVTATSDYRQSLQFKDLDKEKKKISIQVTRSGYRQKMSIYDLLPGDIVHLSIGDQVPADGLFISGFSVLIDESSLTGESEPVMVSSQSPFLLSGTKVQDGSCKMIVTTVGMRTQWGKLMATLSEGGDDETPLQVKLNGVATIIGKIGLFFAVVTFAVLVQGLFSSKIREGTHWSWSGDDALQMLEFFAVAVTIVVVAVPEGLPLAVTLSLAFAMKKMMNDKALVRHLAACETMGSATSICSDKTGTLTTNHMTVVKSCICMNVENAEKASVLISTLPESAKKLLLQSIFNNTGGEVVVNKDGKREILGTPTETALLEFGLSLGGDFLTERQACKLLKVEPFNSLKKRMGVMIELPEGGIRAHTKGASEIVLAACEKVINSNGEIVPLDEGSVKHLNSTIDQFANEALRTLCLAYMELENGVSVENPIPSTGFTCIGIVGIKDPVRPGVKESVAVCRSAGITVRMVTGDNINTAKAIARECGILTDDGLAIEGPDFREKSQKELLELIPKIQVMARSSPLDKHTLVKHLRTTFDEVVAVVAKESADVIILDDNFSTIVTVAKWGRSVYVNIQKFVQFQLTVNIVALIVNFSSACLTGTAPLTAVQLLWVNMIMDTLGALALATEPPNDELMKRTPVGRKGNFISNVMWRNILGQSLYQFFVICLLQAKGKAIFGLLGPDSELILNTLIFNSFVFCQIFNEVSSREMEEIDVFKGILDNYVFVGVLTCTVFFQIIIIEFLGTFANTTPLTLPQWFVSILIGFLGMPIAAWLKTIPV | 997 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 21500638 | 21504664 | - | Bda008078.1 | Bda11g01478 | 16586 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01478 | 997 | Gene3D | - | 17 | 77 | - | - | |
Bda11g01478 | 997 | SMART | Cation_ATPase_N_a_2 | 126 | 200 | IPR004014 | - | |
Bda11g01478 | 997 | Gene3D | - | 460 | 760 | IPR023214 | - | |
Bda11g01478 | 997 | PANTHER | CALCIUM-TRANSPORTING ATPASE 1 | 762 | 996 | - | - | |
Bda11g01478 | 997 | Gene3D | - | 761 | 996 | - | - | |
Bda11g01478 | 997 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 127 | 996 | IPR023298 | - | |
Bda11g01478 | 997 | Pfam | haloacid dehalogenase-like hydrolase | 659 | 719 | - | - | |
Bda11g01478 | 997 | SUPERFAMILY | HAD-like | 451 | 780 | IPR036412 | - | |
Bda11g01478 | 997 | Pfam | Ca2+-ATPase N terminal autoinhibitory domain | 5 | 50 | IPR024750 | GO:0005516 | |
Bda11g01478 | 997 | PANTHER | CATION TRANSPORTING ATPASE | 5 | 762 | - | - | |
Bda11g01478 | 997 | Pfam | Cation transporting ATPase, C-terminus | 821 | 994 | IPR006068 | - | |
Bda11g01478 | 997 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 465 | 471 | IPR018303 | - | |
Bda11g01478 | 997 | Gene3D | - | 473 | 666 | IPR023299 | GO:0000166 | |
Bda11g01478 | 997 | SUPERFAMILY | Calcium ATPase, transduction domain A | 249 | 343 | IPR008250 | - | |
Bda11g01478 | 997 | TIGRFAM | ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type | 122 | 761 | IPR006408 | GO:0005388|GO:0005524|GO:0016020|GO:0070588 | |
Bda11g01478 | 997 | Pfam | E1-E2 ATPase | 247 | 441 | - | - | |
Bda11g01478 | 997 | Gene3D | - | 178 | 459 | - | - | |
Bda11g01478 | 997 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 403 | 489 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda11g01478 | 997 | TIGRFAM | ATPase_P-type: HAD ATPase, P-type, family IC | 215 | 386 | IPR001757 | GO:0005215|GO:0005524|GO:0016021|GO:0016887 | |
Bda11g01478 | 997 | Pfam | Cation transporter/ATPase, N-terminus | 127 | 195 | IPR004014 | - | |
Bda11g01478 | 997 | PANTHER | CALCIUM-TRANSPORTING ATPASE 1 | 5 | 762 | - | - | |
Bda11g01478 | 997 | PRINTS | P-type cation-transporting ATPase superfamily signature | 681 | 691 | - | - | |
Bda11g01478 | 997 | PRINTS | P-type cation-transporting ATPase superfamily signature | 760 | 772 | - | - | |
Bda11g01478 | 997 | PRINTS | P-type cation-transporting ATPase superfamily signature | 659 | 670 | - | - | |
Bda11g01478 | 997 | PRINTS | P-type cation-transporting ATPase superfamily signature | 463 | 477 | - | - | |
Bda11g01478 | 997 | PRINTS | P-type cation-transporting ATPase superfamily signature | 294 | 308 | - | - | |
Bda11g01478 | 997 | PRINTS | Sodium/potassium-transporting ATPase signature | 584 | 602 | - | - | |
Bda11g01478 | 997 | PRINTS | Sodium/potassium-transporting ATPase signature | 213 | 233 | - | - | |
Bda11g01478 | 997 | PRINTS | Sodium/potassium-transporting ATPase signature | 456 | 477 | - | - | |
Bda11g01478 | 997 | Pfam | Cation transport ATPase (P-type) | 522 | 600 | - | - | |
Bda11g01478 | 997 | PANTHER | CATION TRANSPORTING ATPASE | 762 | 996 | - | - | |
Bda11g01478 | 997 | SUPERFAMILY | Metal cation-transporting ATPase, ATP-binding domain N | 469 | 671 | IPR023299 | GO:0000166 | |
Bda11g01478 | 997 | Gene3D | - | 144 | 346 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda01g00590 | Bda-Chr1:32895573 | Bda11g01478 | Bda-Chr11:21500638 | 0 | dispersed | |
Bda03g01554 | Bda-Chr3:54677413 | Bda11g01478 | Bda-Chr11:21500638 | 0 | dispersed | |
Bda05g01038 | Bda-Chr5:58817771 | Bda11g01478 | Bda-Chr11:21500638 | 0 | dispersed | |
Bda11g01478 | Bda-Chr11:21500638 | Bda12g01035 | Bda-Chr12:42089457 | 0 | dispersed | |
Bda11g01478 | Bda-Chr11:21500638 | Bda03g00182 | Bda-Chr3:1491857 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01478 | K01537 | - | mnt:21392732 | 1668.29 |