Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01541 ATGAGGCTCCTACCCTTCTTCTTCTTCTTCCTCCTCCTCATAAACATTGACCTCTCTGTCTCTAACCATCTTTCTGAACTACGCGCTCTTCTCTCTTTCAAAACCTCCATTGTTTCCGATCCCAAGCTTTTCCTATCAAAGTGGAACGCTTCTGTTCCTCACTGTTCCTGGCCTGGTGTCACCTGCGATTCTCGCCGGCGCGTCGTTGGAATCGACCTCTCCGACCTCAACCTCTATGGAACACTTTCGCCTGAAGTTTCTCACCTCCGTTTCCTCACCAACCTCTCCGTCGCCGCCAATCAGTTCTACGGTTCTATTCCGGTGGAGATCTCTGTAATCGCTCCTCTCCGATATCTGAACCTCTCTAATAATGTTTTCAACGGTACATTTCCGTCGGGGATTTCGCAACTTAAGAATCTGCTAGATTTGGACTTGTACAATAACAATATGACCGGAGAGTTGCCACTTGTGGTTGTCGAAATGCCGCAGCTCCGCCATTTGCACCTGGGTGGGAATTTCTTCGCCGGTAAGATTCCTCCGGAGTATGGTCGCTGGGAGTTTTTGGAGTATTTGGCGGTTTCCGGCAATGAGCTTGAAGGTCCTATTCCATCACAACTAGGAAACTTGACAAAACTCCGCGAGCTTTACATCGGCTACTATAATAGCTTCGACAGTGGTATACCCGCCGAAATCGGGAACTTATCTGAGCTGCTCCGGTTTGATGCTGCAAATTGCGGATTAACCGGTGAGATTCCGCCAGAGCTTGGTAAGCTTCAGAAGCTAGATACTCTGTTTCTACAGGTAAATGCGTTGTCTGGGTCTTTGCCGTCTGAGCTTGGGAGCTTAAAGAGCTTGAAATCCTTGGATTTATCGAACAACTTGCTCGCCGGTGAGATTCCAGATTCTTTTGCTGAGCTCAAGAACTTGACCCTCTTGAATCTTTTCCGAAACAAGCTTCTCGGAGCTATTCCGGAGTTCATCGCCGATTTGCCGGAGCTAGAGGTCTTGCAGTTATGGGAAAACAACTTCACTGGTTCTATTCCTCAAAGCCTGGGGAAGAATGAGAAGCTACTACTTCTCGACCTTTCTTCCAACAAGTTAACCGGAACTCTCCCTCCGGGTATGTGTGCCGGCAACCGGCTGCAGACTTTAATTACTTTAGACAACTTTTTGTTGGGTCCTATTCCAGAATCGCTCGGTGAATGTGAATCTCTCAATCGTATTCGTATGGGGGGGAATTTTTTAAATGGCTCCATTCCAAAGGGTCTCTTTAGCTTACCGGAACTTACTCAGGTCGAGCTGCAGGACAATCTCCTTTCCGGTGAGTTCCCGGCAACTGATTCTTCCTCTAGAGGTCTTGGTCAAATTAGTCTCTCTAACAATCAGCTTTCTGGGTCGCTACCCCGGACGATCGGAAACTTCTCCGGCGTTCAAAAACTTCTTCTCGATGGCAACAAGTTCTCAGGCAAAATTCCCCCGGAAATTGGTAAGTTACAGCAGCTTTCTAAGATAGACTTTAGTGGTAACGATCTCTCTGGTCTAATCACACCAGAAATCAGCCTATGCAAGCTCTTGACCTTCGTTGATCTCAGTAGAAACCAGCTTTCTGGGGAGATCCCAAATGAAATAACCAGTATGAGAATATTAAATTACCTCAATCTTTCAAGAAATCATTTAGTGGGTAACATTCCTTCTTCAATCGCTAGTATGTTAAGCTTATCATCAGTAGATTTTTCATATAATAATCTCTCTGGTTTGGTTCCCGGCACTGGCCAATTCAGCTACTTCAATTACACTTCTTTTCTGGGGAACTCCGGCCTATGCGGCCCGTATTTAGGACCATGCAAAGACGGGAGTTCCAGTCCGAACCATCAAGGCCACTCAAAGAGCTCATTCTCTGCTTCATTGAAGCTCATTCTGGTCATTGGATTGCTTGTTTGCTCCATTGCATTTGCAATTGCAGCCATCGTCAAAGCTCGTTCTTTGAAGAGAGAGAGCGATTCTCGAGCCTGGAAATTGACTGCATTTCAACGATTAGATTTCACCGTAGATGATGTTTTGGATTGCTTGAAAGAAGACAACATTATTGGAAAAGGAGGAGCCGGAATTGTTTATAAAGGAATTATGTCCAATGGCGATATAGTGGCTGTGAAGAGACTTCCGGCTATGAGCCGAGGGGCCCCACACGACCACGGATTCAACGCGGAAATTCAAACTCTAGGACGGATTAAACATCGGCACATTGTTCGATTGCTGGGTTTTTGTGCAAATCGCGATACAAATCTTCTGGTTTATGAGTACATGCCTAATGGGAGCTTAGGTGAAGTTCTTCATGGCAAGAAAGGTGGGCATTTGCTATGGGAGATAAGGTATAAGATTGCTATAGAGGCGGCCAAAGGTCTGTGCTATTTGCATCACGATTGTTCACCGTTGATTGTTCATCGAGACGTGAAATCAAACAACATTTTGCTGGACTCCAACTTTGAAGCTCATGTAGCGGATTTCGGACTTGCCAAGTTCTTGCAGGATTCAGGGACATCCGAATGTATGTCTGCTATTGCCGGTTCTTACGGATACATAGCCCCAGAATATGCATACACCTTAAAGGTAGACGAGAAGAGTGACGTATACAGCTACGGAGTTGTCCTTCTTGAACTTGTTTGCGGGAGAAAACCAGTCGGAGAATTCGGAGATGGAGTCGACATAGTCCAGTGGGTTCGGAGAATGACAGGCTCGAACGAGGAAGGAGTCCTTAAAGTTCTAGACCCAAGACTCTCATCAGTGCCTCTCAACGAGGCAATGCATGCATTCTACGTAGCAATGCTTTGCGTGGAAGAACAGGCGGTAGGGCGCCCCACAATGCGAGAAGTGGTTCAAATTCTCTCAGATGTTCCAAAGCCGGCAGCCCCAAAAATGCAGGGCGACCCTACATGGTCATCGCCCCAACCGGCCATTGAGGCTCATCCAAAGACAACTACTGATCTTCTTAGCATTTGA 2997 46.55 MRLLPFFFFFLLLINIDLSVSNHLSELRALLSFKTSIVSDPKLFLSKWNASVPHCSWPGVTCDSRRRVVGIDLSDLNLYGTLSPEVSHLRFLTNLSVAANQFYGSIPVEISVIAPLRYLNLSNNVFNGTFPSGISQLKNLLDLDLYNNNMTGELPLVVVEMPQLRHLHLGGNFFAGKIPPEYGRWEFLEYLAVSGNELEGPIPSQLGNLTKLRELYIGYYNSFDSGIPAEIGNLSELLRFDAANCGLTGEIPPELGKLQKLDTLFLQVNALSGSLPSELGSLKSLKSLDLSNNLLAGEIPDSFAELKNLTLLNLFRNKLLGAIPEFIADLPELEVLQLWENNFTGSIPQSLGKNEKLLLLDLSSNKLTGTLPPGMCAGNRLQTLITLDNFLLGPIPESLGECESLNRIRMGGNFLNGSIPKGLFSLPELTQVELQDNLLSGEFPATDSSSRGLGQISLSNNQLSGSLPRTIGNFSGVQKLLLDGNKFSGKIPPEIGKLQQLSKIDFSGNDLSGLITPEISLCKLLTFVDLSRNQLSGEIPNEITSMRILNYLNLSRNHLVGNIPSSIASMLSLSSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNSGLCGPYLGPCKDGSSSPNHQGHSKSSFSASLKLILVIGLLVCSIAFAIAAIVKARSLKRESDSRAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGIMSNGDIVAVKRLPAMSRGAPHDHGFNAEIQTLGRIKHRHIVRLLGFCANRDTNLLVYEYMPNGSLGEVLHGKKGGHLLWEIRYKIAIEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSNFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSYGVVLLELVCGRKPVGEFGDGVDIVQWVRRMTGSNEEGVLKVLDPRLSSVPLNEAMHAFYVAMLCVEEQAVGRPTMREVVQILSDVPKPAAPKMQGDPTWSSPQPAIEAHPKTTTDLLSI 998
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 47731550 47734794 - Bda008397.1 Bda11g01541 16649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01541 998 SMART serkin_6 690 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01541 998 SUPERFAMILY L domain-like 356 615 - -
Bda11g01541 998 PANTHER - 13 974 - -
Bda11g01541 998 Gene3D Ribonuclease Inhibitor 24 173 IPR032675 -
Bda11g01541 998 MobiDBLite consensus disorder prediction 975 998 - -
Bda11g01541 998 Gene3D Ribonuclease Inhibitor 174 239 IPR032675 -
Bda11g01541 998 Gene3D Ribonuclease Inhibitor 240 351 IPR032675 -
Bda11g01541 998 Pfam Leucine rich repeat N-terminal domain 25 63 IPR013210 -
Bda11g01541 998 PANTHER UNNAMED PRODUCT 13 974 - -
Bda11g01541 998 MobiDBLite consensus disorder prediction 966 998 - -
Bda11g01541 998 ProSiteProfiles Protein kinase domain profile. 690 969 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01541 998 Pfam Leucine rich repeat 260 319 IPR001611 GO:0005515
Bda11g01541 998 Pfam Leucine rich repeat 116 172 IPR001611 GO:0005515
Bda11g01541 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Bda11g01541 998 SUPERFAMILY Protein kinase-like (PK-like) 683 961 IPR011009 -
Bda11g01541 998 Pfam Protein kinase domain 692 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bda11g01541 998 Gene3D Ribonuclease Inhibitor 355 619 IPR032675 -
Bda11g01541 998 Gene3D Transferase(Phosphotransferase) domain 1 768 974 - -
Bda11g01541 998 Gene3D Phosphorylase Kinase; domain 1 656 767 - -
Bda11g01541 998 SUPERFAMILY RNI-like 71 415 - -
Bda11g01541 998 SMART LRR_typ_2 570 593 IPR003591 -
Bda11g01541 998 SMART LRR_typ_2 282 305 IPR003591 -
Bda11g01541 998 SMART LRR_typ_2 330 354 IPR003591 -
Bda11g01541 998 SMART LRR_typ_2 355 378 IPR003591 -
Bda11g01541 998 SMART LRR_typ_2 161 185 IPR003591 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01541 Bda-Chr11:47731550 Bda12g00350 Bda-Chr12:4028559 0 dispersed
Bda15g00023 Bda-Chr15:1609102 Bda11g01541 Bda-Chr11:47731550 4.29E-06 dispersed
Bda07g01663 Bda-Chr7:30876669 Bda11g01541 Bda-Chr11:47731550 0 transposed
Bda08g00779 Bda-Chr8:10499587 Bda11g01541 Bda-Chr11:47731550 3.67E-14 transposed
Bda09g01120 Bda-Chr9:41803808 Bda11g01541 Bda-Chr11:47731550 7.60E-06 transposed
Bda10g01169 Bda-Chr10:45700097 Bda11g01541 Bda-Chr11:47731550 2.33E-137 transposed
Bda11g00593 Bda-Chr11:6051484 Bda11g01541 Bda-Chr11:47731550 5.75E-07 transposed
Bda10g00028 Bda-Chr10:508517 Bda11g01541 Bda-Chr11:47731550 0 wgd
Bda11g01541 Bda-Chr11:47731550 Bda14g01625 Bda-Chr14:41485244 5.03E-23 wgd
Bda11g01541 Bda-Chr11:47731550 Bda04g00148 Bda-Chr4:4062338 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
69943 PF00069 Pkinase 5.60E-46 CL0016 Bda PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01541 - - mnt:21399160 1522.68