Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01550 | TTGAAAATGGCGGAATCTGTACAAATGAATCTTCCCAGCAAGGCATTTGGCTGGGCTGCGAGAGATACTTCTGGTGTTCTCTCTCCTTTCCATTTCTCGAGAAGAGCAACGGGAGAGAAGGATGTCAAATTTAAGGTGCTTTACTGTGGGGTGTGTCATTCGGACTTTCACATGGCCAAGAACGATTGGGGAATATCCACCTATCCTGTCGTACCAGGACATGAGGTCGTAGGTAAAGTGACAGAGGTTGGCAACAAAGTAGAGAAGTTTAAGGTCGGAGACAGGGTGGGGGTGGGATGCTATGTCGGATCGTGCCGTTCGTGCGACGATTGTTCGAACAACCTCGAAAATTACTGCCAAAAAGCGATATTCACCTACGCATCCAAATACTTTGACGGCACCACCACATACGGAGGTTACTCAGACCACATGGTGACCGATGAACAGTTTGTCGTTCGCATTCCGGACAGCCTCCCCCTGGATGCTTCTGCGCCGTTGTTATGTGCTGGCATCACTGTTTACAGCCCGTTGAGGTATTACGGGCTCGATAAGCCTGGATTGCGGGTTGGTGTTGTAGGCCTCGGCGGCGTCGGCCATGTTGCCGTAAAATTTGCCAAGGCGTTCGGCGCTAAGGTCACAGTGATTAGCACATCAGCTCATAAAAAGGAGGAGGCTCTTCAACGTCTTGGTGCTGACTCCTTTTTGAGTAGCCATAATCAAGAAGAATTACAGGCCGCCATGGGCATGTTTGATGGTATCCTCGACACTGTCTCTGCAGTTCATTCTCTTCTTCCTCTACTCAGACTTTTGAAATCACATGGAAAACTTATTTTGCTGGGAATGCCAGATAAGCCTTTTGAACTTCCGTCGTTTCCCCTCGCTGTCGGCAGGAAAATGGTGGCCGGAAGTGCCGCCGGGGGTCTGAAGGAGACCCAAGAAATGATAGATTTTGCGGCCAAACACAACATAACGGCGGATATCGAGGTTATCCCAATTGACTACGTGAATGCCGCCGTGGAGAGGCTTCTGCAAGCAGATGTCAAATATCGATTCGTCATCGATATTGGGAACACCTTGGGTTGA | 1083 | 49.49 | LKMAESVQMNLPSKAFGWAARDTSGVLSPFHFSRRATGEKDVKFKVLYCGVCHSDFHMAKNDWGISTYPVVPGHEVVGKVTEVGNKVEKFKVGDRVGVGCYVGSCRSCDDCSNNLENYCQKAIFTYASKYFDGTTTYGGYSDHMVTDEQFVVRIPDSLPLDASAPLLCAGITVYSPLRYYGLDKPGLRVGVVGLGGVGHVAVKFAKAFGAKVTVISTSAHKKEEALQRLGADSFLSSHNQEELQAAMGMFDGILDTVSAVHSLLPLLRLLKSHGKLILLGMPDKPFELPSFPLAVGRKMVAGSAAGGLKETQEMIDFAAKHNITADIEVIPIDYVNAAVERLLQADVKYRFVIDIGNTLG | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 48202965 | 48204513 | + | Bda008410.1 | Bda11g01550 | 16658 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01550 | 360 | Pfam | Zinc-binding dehydrogenase | 196 | 319 | IPR013149 | - | |
Bda11g01550 | 360 | Gene3D | - | 169 | 325 | - | - | |
Bda11g01550 | 360 | SUPERFAMILY | GroES-like | 22 | 186 | IPR011032 | - | |
Bda11g01550 | 360 | PANTHER | LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE | 10 | 359 | - | - | |
Bda11g01550 | 360 | Pfam | Alcohol dehydrogenase GroES-like domain | 40 | 153 | IPR013154 | - | |
Bda11g01550 | 360 | CDD | CAD1 | 16 | 354 | - | - | |
Bda11g01550 | 360 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 158 | 323 | IPR036291 | - | |
Bda11g01550 | 360 | Gene3D | - | 18 | 355 | - | - | |
Bda11g01550 | 360 | PANTHER | ALDEHYDE REDUCTASE | 10 | 359 | - | - | |
Bda11g01550 | 360 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 73 | 87 | IPR002328 | GO:0008270|GO:0016491 | |
Bda11g01550 | 360 | SMART | PKS_ER_names_mod | 25 | 353 | IPR020843 | GO:0016491 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01550 | Bda-Chr11:48202965 | Bda14g01320 | Bda-Chr14:14817228 | 0 | dispersed | |
Bda10g00045 | Bda-Chr10:962492 | Bda11g01550 | Bda-Chr11:48202965 | 1.18E-143 | wgd | |
Bda11g01550 | Bda-Chr11:48202965 | Bda14g01315 | Bda-Chr14:14727293 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01550 | - | - | qsu:112006220 | 553.132 |