Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01550 TTGAAAATGGCGGAATCTGTACAAATGAATCTTCCCAGCAAGGCATTTGGCTGGGCTGCGAGAGATACTTCTGGTGTTCTCTCTCCTTTCCATTTCTCGAGAAGAGCAACGGGAGAGAAGGATGTCAAATTTAAGGTGCTTTACTGTGGGGTGTGTCATTCGGACTTTCACATGGCCAAGAACGATTGGGGAATATCCACCTATCCTGTCGTACCAGGACATGAGGTCGTAGGTAAAGTGACAGAGGTTGGCAACAAAGTAGAGAAGTTTAAGGTCGGAGACAGGGTGGGGGTGGGATGCTATGTCGGATCGTGCCGTTCGTGCGACGATTGTTCGAACAACCTCGAAAATTACTGCCAAAAAGCGATATTCACCTACGCATCCAAATACTTTGACGGCACCACCACATACGGAGGTTACTCAGACCACATGGTGACCGATGAACAGTTTGTCGTTCGCATTCCGGACAGCCTCCCCCTGGATGCTTCTGCGCCGTTGTTATGTGCTGGCATCACTGTTTACAGCCCGTTGAGGTATTACGGGCTCGATAAGCCTGGATTGCGGGTTGGTGTTGTAGGCCTCGGCGGCGTCGGCCATGTTGCCGTAAAATTTGCCAAGGCGTTCGGCGCTAAGGTCACAGTGATTAGCACATCAGCTCATAAAAAGGAGGAGGCTCTTCAACGTCTTGGTGCTGACTCCTTTTTGAGTAGCCATAATCAAGAAGAATTACAGGCCGCCATGGGCATGTTTGATGGTATCCTCGACACTGTCTCTGCAGTTCATTCTCTTCTTCCTCTACTCAGACTTTTGAAATCACATGGAAAACTTATTTTGCTGGGAATGCCAGATAAGCCTTTTGAACTTCCGTCGTTTCCCCTCGCTGTCGGCAGGAAAATGGTGGCCGGAAGTGCCGCCGGGGGTCTGAAGGAGACCCAAGAAATGATAGATTTTGCGGCCAAACACAACATAACGGCGGATATCGAGGTTATCCCAATTGACTACGTGAATGCCGCCGTGGAGAGGCTTCTGCAAGCAGATGTCAAATATCGATTCGTCATCGATATTGGGAACACCTTGGGTTGA 1083 49.49 LKMAESVQMNLPSKAFGWAARDTSGVLSPFHFSRRATGEKDVKFKVLYCGVCHSDFHMAKNDWGISTYPVVPGHEVVGKVTEVGNKVEKFKVGDRVGVGCYVGSCRSCDDCSNNLENYCQKAIFTYASKYFDGTTTYGGYSDHMVTDEQFVVRIPDSLPLDASAPLLCAGITVYSPLRYYGLDKPGLRVGVVGLGGVGHVAVKFAKAFGAKVTVISTSAHKKEEALQRLGADSFLSSHNQEELQAAMGMFDGILDTVSAVHSLLPLLRLLKSHGKLILLGMPDKPFELPSFPLAVGRKMVAGSAAGGLKETQEMIDFAAKHNITADIEVIPIDYVNAAVERLLQADVKYRFVIDIGNTLG 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 48202965 48204513 + Bda008410.1 Bda11g01550 16658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01550 360 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Bda11g01550 360 Gene3D - 169 325 - -
Bda11g01550 360 SUPERFAMILY GroES-like 22 186 IPR011032 -
Bda11g01550 360 PANTHER LOW QUALITY PROTEIN: 8-HYDROXYGERANIOL DEHYDROGENASE-LIKE 10 359 - -
Bda11g01550 360 Pfam Alcohol dehydrogenase GroES-like domain 40 153 IPR013154 -
Bda11g01550 360 CDD CAD1 16 354 - -
Bda11g01550 360 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Bda11g01550 360 Gene3D - 18 355 - -
Bda11g01550 360 PANTHER ALDEHYDE REDUCTASE 10 359 - -
Bda11g01550 360 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Bda11g01550 360 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01550 Bda-Chr11:48202965 Bda14g01320 Bda-Chr14:14817228 0 dispersed
Bda10g00045 Bda-Chr10:962492 Bda11g01550 Bda-Chr11:48202965 1.18E-143 wgd
Bda11g01550 Bda-Chr11:48202965 Bda14g01315 Bda-Chr14:14727293 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01550 - - qsu:112006220 553.132