Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01561 | ATGAACAGACCTTGCAGCTCTGATTCCTTATCTGCTCTCATGTCTATCTGCCCAGCTACAGAGGATCACAGTCCAAGAAACAACAGCGTTTTCGAAAGGGGATTTCAATCCATGTTTGATGAAGACGACTGTACAGAAGAATCTGGACATGTTTCTGAGAAGAAGAGGCGTTTGGGGTTGGACCAAGTTAAGGCGCTGGAGAAAAACTTCGAGCTGGACAACAAGCTCGAACCGGAGAGAAAAGTGAAGTTAGCTCGAGAGCTTGGGTTGCAACCCAGGCAAGTCGCTGTTTGGTTCCAAAATCGACGAGCCAGATGGAAAACTAAGCAATTAGAGAGAGATTATGGCGCTCTTAAATCTAGTTATGATGCTCTCAAGCTTAAATTCGATACTCTTCGACGCGACAACGAAGGTCTTCTCGAGGAGATTGAGGAAGCGAAAGCTAAGCTGTTTGAAGAAGAGAATACAGAAAGCAATCTCTCAGTGAAAGAAGAAATAACAATGGCGGATTCCACTCGAATCGAGCAAACAAACCCCCCCTCTGATAACCCTCTTCTTGTCGAATCCGAATCCCAAGACTTCCACTACCAGAGTTTCATCAACAACAATGGAGGAGAATCAGGGTACGAAATGTCATTCCTCGCAGGCCATTCGAAAGATGGGTCGTCCGACGAGAGCGATTCAAGCGCAATACTGAACAGTCCAAAGGCGGCCATTTCCTCTCCGCCGGCTCTCTGTAATAACCAGAAACTGGCTTGGTCTTCTTCCGGGAAAACGAAGGACTCGTCATCTTCTGGTTCGTCTCTGAACTAG | 813 | 46.74 | MNRPCSSDSLSALMSICPATEDHSPRNNSVFERGFQSMFDEDDCTEESGHVSEKKRRLGLDQVKALEKNFELDNKLEPERKVKLARELGLQPRQVAVWFQNRRARWKTKQLERDYGALKSSYDALKLKFDTLRRDNEGLLEEIEEAKAKLFEEENTESNLSVKEEITMADSTRIEQTNPPSDNPLLVESESQDFHYQSFINNNGGESGYEMSFLAGHSKDGSSDESDSSAILNSPKAAISSPPALCNNQKLAWSSSGKTKDSSSSGSSLN | 270 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 48487533 | 48488572 | + | Bda008424.1 | Bda11g01561 | 16669 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01561 | 270 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-6-LIKE | 3 | 268 | - | - | |
Bda11g01561 | 270 | PRINTS | Lambda-repressor HTH signature | 80 | 89 | IPR000047 | GO:0003677 | |
Bda11g01561 | 270 | PRINTS | Lambda-repressor HTH signature | 89 | 105 | IPR000047 | GO:0003677 | |
Bda11g01561 | 270 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN | 3 | 268 | IPR045224 | GO:0003700 | |
Bda11g01561 | 270 | MobiDBLite | consensus disorder prediction | 225 | 270 | - | - | |
Bda11g01561 | 270 | Pfam | Homeobox associated leucine zipper | 109 | 150 | IPR003106 | GO:0006355|GO:0043565 | |
Bda11g01561 | 270 | MobiDBLite | consensus disorder prediction | 210 | 270 | - | - | |
Bda11g01561 | 270 | Coils | Coil | 122 | 156 | - | - | |
Bda11g01561 | 270 | ProSiteProfiles | 'Homeobox' domain profile. | 49 | 109 | IPR001356 | GO:0003677 | |
Bda11g01561 | 270 | MobiDBLite | consensus disorder prediction | 152 | 189 | - | - | |
Bda11g01561 | 270 | SMART | HOX_1 | 52 | 113 | IPR001356 | GO:0003677 | |
Bda11g01561 | 270 | MobiDBLite | consensus disorder prediction | 161 | 189 | - | - | |
Bda11g01561 | 270 | Gene3D | - | 49 | 116 | - | - | |
Bda11g01561 | 270 | SUPERFAMILY | Homeodomain-like | 43 | 111 | IPR009057 | - | |
Bda11g01561 | 270 | ProSitePatterns | 'Homeobox' domain signature. | 84 | 107 | IPR017970 | GO:0000981|GO:0006355 | |
Bda11g01561 | 270 | CDD | homeodomain | 54 | 110 | IPR001356 | GO:0003677 | |
Bda11g01561 | 270 | Pfam | Homeodomain | 55 | 107 | IPR001356 | GO:0003677 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda07g00254 | Bda-Chr7:3442887 | Bda11g01561 | Bda-Chr11:48487533 | 8.45E-57 | dispersed | |
Bda10g00072 | Bda-Chr10:1578941 | Bda11g01561 | Bda-Chr11:48487533 | 7.55E-70 | dispersed | |
Bda11g01561 | Bda-Chr11:48487533 | Bda15g00022 | Bda-Chr15:1565106 | 1.06E-36 | dispersed | |
Bda07g00122 | Bda-Chr7:1505487 | Bda11g01561 | Bda-Chr11:48487533 | 1.55E-35 | transposed | |
Bda11g01561 | Bda-Chr11:48487533 | Bda14g01335 | Bda-Chr14:15138246 | 2.10E-98 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
16704 | PF00046 | Homeodomain | 9.50E-16 | CL0123 | Bda | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01561 | K09338 | - | qsu:112039557 | 278.1 |