Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bda11g01581 | ATGGCTCTCTCCGATAACCGTCATCGATCTCTGATCCCCACCTTCCTATACTCGGGTTCTCCGTCATCGTCTCTGTCGTCGCCCAAAAGGCTTTCTGATTTGCATTCTTCCGTGAAAACGACTCTCGGATTGCCTGCATCAACCCCGCTGAGCGATGCGGCACCGAGGAGCTTCGTGATTCCTGCTCCGCGGGAGAAGATTGAGATGTACTCACCCGCTTTCTATGCCGCGTGTACCACCGGTGGAATATTGAGCTGCGGTCTCACGCACATGACCGTCACTCCTCTCGACCTTGTTAAATGCAATATGCAGATTGATCCAGCAAAATACAAGAGCATTACATCTGGTTTTGGAGTTCTGTTCAAGGAGCAGGGAGCCAAAGGATTCTTTAGGGGTTGGGTGCCTACCTTGCTAGGTTACAGTGCTCAGGGTGCTTGTAAATTTGGATTTTATGAGTTCTTTAAGAAGTACTACTCCGATATTGCGGGGCCTGAGTATGCAGCCAAGTACAAGACCTTGATATATTTAGCTGGTTCAGCATCTGCTGAAGTTATTGCTGATGTTGCTCTCTGTCCAATGGAGGCTGTGAAAGTTCGCGTCCAAACTCAGCCAGGCTTTGCTCGTGGTTTGGGTGATGGGCTTCCAAAGTTTATTAGGTCTGAAGGTGCTCTCGGATTGTACAAGGGGCTAGTTCCTCTATGGGGTCGTCAAATTCCTTATACAATGATGAAATTTGCATCTTTTGAGACTATTGTGGAGATGATGTATAAATATGCAATTCCAACGCCCAAAGACCAGTGTAGCAAATCGCTGCAGCTTGGGGTGAGCTTTGCTGGCGGATATGTGGCTGGTGTGCTCTGTGCAATCGTCTCTCACCCTGCTGACAACCTCGTGTCTTTTCTCAACAATGCCAAGGGGGCAACTGCCGGTGATGCAGTAAAGCAGCTGGGATTGTGGGGGCTTTTTACCCGTGGCCTTCCTCTTCGTATTTTAATGATTGGGACCCTTACTGGGGCTCAGTGGGGACTATATGATGCATTCAAAGTTTTTGTTGGGCTGTAA | 1062 | 48.68 | MALSDNRHRSLIPTFLYSGSPSSSLSSPKRLSDLHSSVKTTLGLPASTPLSDAAPRSFVIPAPREKIEMYSPAFYAACTTGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSITSGFGVLFKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLGDGLPKFIRSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMMYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATAGDAVKQLGLWGLFTRGLPLRILMIGTLTGAQWGLYDAFKVFVGL | 353 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 49077833 | 49080646 | + | Bda008452.1 | Bda11g01581 | 16689 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bda11g01581 | 353 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 271 | 350 | IPR018108 | - | |
Bda11g01581 | 353 | PANTHER | PHOSPHATE TRANSPORTER | 1 | 353 | - | - | |
Bda11g01581 | 353 | SUPERFAMILY | Mitochondrial carrier | 76 | 346 | IPR023395 | - | |
Bda11g01581 | 353 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 73 | 157 | IPR018108 | - | |
Bda11g01581 | 353 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 170 | 254 | IPR018108 | - | |
Bda11g01581 | 353 | Pfam | Mitochondrial carrier protein | 76 | 159 | IPR018108 | - | |
Bda11g01581 | 353 | Pfam | Mitochondrial carrier protein | 174 | 258 | IPR018108 | - | |
Bda11g01581 | 353 | Gene3D | Mitochondrial carrier domain | 74 | 351 | IPR023395 | - | |
Bda11g01581 | 353 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 1 | 353 | IPR044677 | GO:0005315|GO:1990547 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bda11g01581 | Bda-Chr11:49077833 | Bda13g01890 | Bda-Chr13:43275700 | 7.95E-19 | dispersed | |
Bda11g01581 | Bda-Chr11:49077833 | Bda01g01054 | Bda-Chr1:44699037 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bda11g01581 | K15102 | - | twl:120004074 | 590.112 |