Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bda11g01581 ATGGCTCTCTCCGATAACCGTCATCGATCTCTGATCCCCACCTTCCTATACTCGGGTTCTCCGTCATCGTCTCTGTCGTCGCCCAAAAGGCTTTCTGATTTGCATTCTTCCGTGAAAACGACTCTCGGATTGCCTGCATCAACCCCGCTGAGCGATGCGGCACCGAGGAGCTTCGTGATTCCTGCTCCGCGGGAGAAGATTGAGATGTACTCACCCGCTTTCTATGCCGCGTGTACCACCGGTGGAATATTGAGCTGCGGTCTCACGCACATGACCGTCACTCCTCTCGACCTTGTTAAATGCAATATGCAGATTGATCCAGCAAAATACAAGAGCATTACATCTGGTTTTGGAGTTCTGTTCAAGGAGCAGGGAGCCAAAGGATTCTTTAGGGGTTGGGTGCCTACCTTGCTAGGTTACAGTGCTCAGGGTGCTTGTAAATTTGGATTTTATGAGTTCTTTAAGAAGTACTACTCCGATATTGCGGGGCCTGAGTATGCAGCCAAGTACAAGACCTTGATATATTTAGCTGGTTCAGCATCTGCTGAAGTTATTGCTGATGTTGCTCTCTGTCCAATGGAGGCTGTGAAAGTTCGCGTCCAAACTCAGCCAGGCTTTGCTCGTGGTTTGGGTGATGGGCTTCCAAAGTTTATTAGGTCTGAAGGTGCTCTCGGATTGTACAAGGGGCTAGTTCCTCTATGGGGTCGTCAAATTCCTTATACAATGATGAAATTTGCATCTTTTGAGACTATTGTGGAGATGATGTATAAATATGCAATTCCAACGCCCAAAGACCAGTGTAGCAAATCGCTGCAGCTTGGGGTGAGCTTTGCTGGCGGATATGTGGCTGGTGTGCTCTGTGCAATCGTCTCTCACCCTGCTGACAACCTCGTGTCTTTTCTCAACAATGCCAAGGGGGCAACTGCCGGTGATGCAGTAAAGCAGCTGGGATTGTGGGGGCTTTTTACCCGTGGCCTTCCTCTTCGTATTTTAATGATTGGGACCCTTACTGGGGCTCAGTGGGGACTATATGATGCATTCAAAGTTTTTGTTGGGCTGTAA 1062 48.68 MALSDNRHRSLIPTFLYSGSPSSSLSSPKRLSDLHSSVKTTLGLPASTPLSDAAPRSFVIPAPREKIEMYSPAFYAACTTGGILSCGLTHMTVTPLDLVKCNMQIDPAKYKSITSGFGVLFKEQGAKGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPMEAVKVRVQTQPGFARGLGDGLPKFIRSEGALGLYKGLVPLWGRQIPYTMMKFASFETIVEMMYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVLCAIVSHPADNLVSFLNNAKGATAGDAVKQLGLWGLFTRGLPLRILMIGTLTGAQWGLYDAFKVFVGL 353
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 49077833 49080646 + Bda008452.1 Bda11g01581 16689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bda11g01581 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 271 350 IPR018108 -
Bda11g01581 353 PANTHER PHOSPHATE TRANSPORTER 1 353 - -
Bda11g01581 353 SUPERFAMILY Mitochondrial carrier 76 346 IPR023395 -
Bda11g01581 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 73 157 IPR018108 -
Bda11g01581 353 ProSiteProfiles Solute carrier (Solcar) repeat profile. 170 254 IPR018108 -
Bda11g01581 353 Pfam Mitochondrial carrier protein 76 159 IPR018108 -
Bda11g01581 353 Pfam Mitochondrial carrier protein 174 258 IPR018108 -
Bda11g01581 353 Gene3D Mitochondrial carrier domain 74 351 IPR023395 -
Bda11g01581 353 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 1 353 IPR044677 GO:0005315|GO:1990547
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bda11g01581 Bda-Chr11:49077833 Bda13g01890 Bda-Chr13:43275700 7.95E-19 dispersed
Bda11g01581 Bda-Chr11:49077833 Bda01g01054 Bda-Chr1:44699037 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bda11g01581 K15102 - twl:120004074 590.112